RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 DRC3Q9H069 523 aa9.05□□□□□ -0.96
SMN2-214ENST00000626847 MIS12Q9H081 205 aa9.05□□□□□ -0.96
SMN2-214ENST00000626847 NAT10Q9H0A0 1025 aaKnown RBP9.05□□□□□ -0.96
SMN2-214ENST00000626847 CCDC113Q9H0I3 377 aa9.05□□□□□ -0.96
SMN2-214ENST00000626847 SUV39H2Q9H5I1 410 aa9.05□□□□□ -0.96
SMN2-214ENST00000626847 SEPT11Q9NVA2 429 aaKnown RBP9.05□□□□□ -0.96
SMN2-214ENST00000626847 NDUFA13Q9P0J0 144 aa9.05□□□□□ -0.96
SMN2-214ENST00000626847 PRR12Q9ULL5 1215 aa9.05□□□□□ -0.96
SMN2-214ENST00000626847 ITGB4P16144 1822 aa9.05□□□□□ -0.96
SMN2-214ENST00000626847 PCDH11XQ9BZA7 1347 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 PCDH11YQ9BZA8 1340 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 ARPC4-TTLL3A0A0A6YYG9 625 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 HNRNPCL2B2RXH8 293 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 SPECC1L-ADORA2AF8WAN1 911 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 MUSKO15146 869 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 HNRNPCL1O60812 293 aaKnown RBP9.04□□□□□ -0.96
SMN2-214ENST00000626847 GSTA2P09210 222 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 LINGO3P0C6S8 592 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 IDEP14735 1019 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 CPA3P15088 417 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 AP2B1P63010 937 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 PTSQ03393 145 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 TUBB2AQ13885 445 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 ACAP1Q15027 740 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 C15orf59Q2T9L4 293 aaPredicted RBP9.04□□□□□ -0.96
SMN2-214ENST00000626847 CFAP100Q494V2 611 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 LCE2CQ5TA81 110 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 TWF2Q6IBS0 349 aaKnown RBP9.04□□□□□ -0.96
SMN2-214ENST00000626847 PDXDC1Q6P996 788 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 USP48Q86UV5 1035 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 CCDC28BQ9BUN5 200 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 TUBB2BQ9BVA1 445 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 GSX2Q9BZM3 304 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 FAM192AQ9GZU8 254 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 DCTPP1Q9H773 170 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 ATP13A2Q9NQ11 1180 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 CTNNAL1Q9UBT7 734 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 EFR3BQ9Y2G0 817 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 C15orf41Q9Y2V0 281 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 FADS3Q9Y5Q0 445 aa9.04□□□□□ -0.96
SMN2-214ENST00000626847 RGPD2P0DJD1 1756 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 TRIM43BA6NCK2 446 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 SOBPA7XYQ1 873 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 C19orf81C9J6K1 198 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 BUB1BO60566 1050 aaPredicted RBP9.03□□□□□ -0.96
SMN2-214ENST00000626847 USO1O60763 962 aaKnown RBP9.03□□□□□ -0.96
SMN2-214ENST00000626847 MMP20O60882 483 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 AOC2O75106 756 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 TACC1O75410 805 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 RNASEH2AO75792 299 aaKnown RBP9.03□□□□□ -0.96
SMN2-214ENST00000626847 GSTT1P30711 240 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 UBASH3AP57075 661 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 NLRP12P59046 1061 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 GSTM4Q03013 218 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 HSPA14Q0VDF9 509 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 GRM2Q14416 872 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 NDUFAF5Q5TEU4 345 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 ZSCAN25Q6NSZ9 544 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 TUBA3EQ6PEY2 450 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 SNX32Q86XE0 403 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 ZNF654Q8IZM8 581 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 CNTROBQ8N137 903 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 CRIPAKQ8N1N5 446 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 TMCO5AQ8N6Q1 288 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 DQX1Q8TE96 717 aaKnown RBP9.03□□□□□ -0.96
SMN2-214ENST00000626847 ARHGEF2Q92974 986 aaKnown RBP9.03□□□□□ -0.96
SMN2-214ENST00000626847 C1orf74Q96LT6 269 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 PSKH2Q96QS6 385 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 HNRNPABQ99729 332 aaKnown RBP9.03□□□□□ -0.96
SMN2-214ENST00000626847 IER2Q9BTL4 223 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 SPZ1Q9BXG8 430 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 VCXQ9H320 206 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 PREBQ9HCU5 417 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 KMT5AQ9NQR1 393 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 KCTD5Q9NXV2 234 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 AIPL1Q9NZN9 384 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 MARK1Q9P0L2 795 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 GIT1Q9Y2X7 761 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 ZNF711Q9Y462 761 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 CD163L1Q9NR16 1453 aa9.03□□□□□ -0.96
SMN2-214ENST00000626847 DICER1Q9UPY3 1922 aaKnown RBP9.02□□□□□ -0.97
SMN2-214ENST00000626847 FRMD3A2A2Y4 597 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 POLRMTO00411 1230 aaKnown RBP9.02□□□□□ -0.97
SMN2-214ENST00000626847 EFSO43281 561 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 FOXD2O60548 495 aaPredicted RBP9.02□□□□□ -0.97
SMN2-214ENST00000626847 ZC3H11AO75152 810 aaKnown RBP eCLIP9.02□□□□□ -0.97
SMN2-214ENST00000626847 CDC45O75419 566 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 TADA3O75528 432 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 PSAPP07602 524 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 MAPTP10636 758 aaKnown RBP9.02□□□□□ -0.97
SMN2-214ENST00000626847 PCP11498 1178 aaKnown RBP9.02□□□□□ -0.97
SMN2-214ENST00000626847 CASP2P42575 452 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 MTTPP55157 894 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 SNX16P57768 344 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 MXRA7P84157 204 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 STK3Q13188 491 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 LAMC2Q13753 1193 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 RAPGEF1Q13905 1077 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 PDE3AQ14432 1141 aa9.02□□□□□ -0.97
SMN2-214ENST00000626847 GKAP1Q5VSY0 366 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms