RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 KCNMB3Q9NPA1 279 aa28.29■■■□□ 2.12
R3HDM4-208ENST00000626716 VAV3Q9UKW4 847 aa28.29■■■□□ 2.12
R3HDM4-208ENST00000626716 ZC3H11AO75152 810 aaKnown RBP eCLIP28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 CA8P35219 290 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 RAB27AP51159 221 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 NPEPPSP55786 919 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 ITIH3Q06033 890 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 NOMO2Q5JPE7 1267 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 CES5AQ6NT32 575 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 NEK8Q86SG6 692 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 SUGP1Q8IWZ8 645 aaKnown RBP28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 SLC7A3Q8WY07 619 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 ADAM7Q9H2U9 754 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 IFT122Q9HBG6 1241 aa28.28■■■□□ 2.12
R3HDM4-208ENST00000626716 OFD1O75665 1012 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 P4HBP07237 508 aaKnown RBP28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 GCFC2P16383 781 aaKnown RBP28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 XBP1P17861 261 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 SCRN1Q12765 414 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 PTPN21Q16825 1174 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 FBXL6Q8N531 539 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 CEP170P1Q96L14 293 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 NRDE2Q9H7Z3 1164 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 TBC1D13Q9NVG8 400 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 NR2E1Q9Y466 385 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 PPME1Q9Y570 386 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 COL4A3BPQ9Y5P4 624 aa28.27■■■□□ 2.12
R3HDM4-208ENST00000626716 MEIS3P2A8K0S8 358 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 GALTP07902 379 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 POLGP54098 1239 aaPredicted RBP28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 IER5LQ5T953 404 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 DDX53Q86TM3 631 aaKnown RBP28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 TMEM173Q86WV6 379 aaPredicted RBP28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 ZNF579Q8NAF0 562 aaKnown RBP28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 TMEM87AQ8NBN3 555 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 PGBD4Q96DM1 585 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 IGSF21Q96ID5 467 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 NECTIN4Q96NY8 510 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 ZBP1Q9H171 429 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 INPP5FQ9Y2H2 1132 aa28.26■■■□□ 2.11
R3HDM4-208ENST00000626716 CCNT1O60563 726 aaKnown RBP28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 SP100P23497 879 aaPredicted RBP28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 RNASELQ05823 741 aaKnown RBP28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 GIT2Q14161 759 aa28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 PRPF31Q8WWY3 499 aaKnown RBP28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 ASIC4Q96FT7 647 aa28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 NAP1L4Q99733 375 aaKnown RBP28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 PRRX2Q99811 253 aa28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 DHX33Q9H6R0 707 aaKnown RBP28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 AGPAT5Q9NUQ2 364 aa28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 WRAP73Q9P2S5 460 aaPredicted RBP28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 CDH22Q9UJ99 828 aa28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 PCDHB2Q9Y5E7 798 aa28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 IRAK3Q9Y616 596 aa28.25■■■□□ 2.11
R3HDM4-208ENST00000626716 STK36Q9NRP7 1315 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 TBX3O15119 743 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 MARCH6O60337 910 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 CTSAP10619 480 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 EPHA7Q15375 998 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 SRGAP1Q7Z6B7 1085 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 ZBTB33Q86T24 672 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 C4orf19Q8IY42 314 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 PSPC1Q8WXF1 523 aaKnown RBP28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 HAS1Q92839 578 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 TSHZ2Q9NRE2 1034 aa28.24■■■□□ 2.11
R3HDM4-208ENST00000626716 SRGAP2CP0DJJ0 459 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 RFC5P40937 340 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 PIK3AP1Q6ZUJ8 805 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 OTUD6AQ7L8S5 288 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 PRSS33Q8NF86 280 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 OXER1Q8TDS5 423 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 AUTS2Q8WXX7 1259 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 TMEM143Q96AN5 459 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 GBP3Q9H0R5 595 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 POMKQ9H5K3 350 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 GJB4Q9NTQ9 266 aa28.23■■■□□ 2.11
R3HDM4-208ENST00000626716 PFKFB2O60825 505 aa28.22■■■□□ 2.11
R3HDM4-208ENST00000626716 MTHFRP42898 656 aa28.22■■■□□ 2.11
R3HDM4-208ENST00000626716 MRPL10Q7Z7H8 261 aaKnown RBP28.22■■■□□ 2.11
R3HDM4-208ENST00000626716 URGCPQ8TCY9 931 aa28.22■■■□□ 2.11
R3HDM4-208ENST00000626716 RIPOR3Q96MK2 946 aa28.22■■■□□ 2.11
R3HDM4-208ENST00000626716 DZANK1Q9NVP4 752 aa28.22■■■□□ 2.11
R3HDM4-208ENST00000626716 DNAJB4Q9UDY4 337 aa28.22■■■□□ 2.11
R3HDM4-208ENST00000626716 TPCN1Q9ULQ1 816 aa28.22■■■□□ 2.11
R3HDM4-208ENST00000626716 ASAP2O43150 1006 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 NEFLP07196 543 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 YWHABP31946 246 aaKnown RBP28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 SLC11A1P49279 550 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 PTPN5P54829 565 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 LAMTOR4Q0VGL1 99 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 RARS2Q5T160 578 aaKnown RBP28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 AGMOQ6ZNB7 445 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 ZNF280BQ86YH2 543 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 BCL7CQ8WUZ0 217 aaPredicted RBP28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 LXNQ9BS40 222 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 MINDY3Q9H8M7 445 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 RGL1Q9NZL6 768 aa28.21■■■□□ 2.11
R3HDM4-208ENST00000626716 GAS2O43903 313 aaKnown RBP28.2■■■□□ 2.1
R3HDM4-208ENST00000626716 BAG4O95429 457 aaKnown RBP28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms