RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 IRF2BP2Q7Z5L9 587 aa21.46■■□□□ 1.03
TREX1-205ENST00000625293 IFNL1Q8IU54 200 aa21.46■■□□□ 1.03
TREX1-205ENST00000625293 MCPH1Q8NEM0 835 aa21.46■■□□□ 1.03
TREX1-205ENST00000625293 SEPT9Q9UHD8 586 aaPredicted RBP21.46■■□□□ 1.03
TREX1-205ENST00000625293 AJAP1Q9UKB5 411 aaPredicted RBP21.46■■□□□ 1.03
TREX1-205ENST00000625293 TBX20Q9UMR3 447 aa21.46■■□□□ 1.03
TREX1-205ENST00000625293 DUSP10Q9Y6W6 482 aa21.46■■□□□ 1.03
TREX1-205ENST00000625293 CCL15-CCL14A0A0B4J2E2 113 aa21.45■■□□□ 1.02
TREX1-205ENST00000625293 SORBS3O60504 671 aa21.45■■□□□ 1.02
TREX1-205ENST00000625293 GFPT1Q06210 699 aaPredicted RBP21.45■■□□□ 1.02
TREX1-205ENST00000625293 DMP1Q13316 513 aaPredicted RBP21.45■■□□□ 1.02
TREX1-205ENST00000625293 CCL15Q16663 113 aa21.45■■□□□ 1.02
TREX1-205ENST00000625293 Q3C1V9 767 aa21.45■■□□□ 1.02
TREX1-205ENST00000625293 CBWD6Q4V339 395 aa21.45■■□□□ 1.02
TREX1-205ENST00000625293 TDRD12Q587J7 1177 aaKnown RBP21.45■■□□□ 1.02
TREX1-205ENST00000625293 CBWD3Q5JTY5 395 aa21.45■■□□□ 1.02
TREX1-205ENST00000625293 CBWD5Q5RIA9 395 aa21.45■■□□□ 1.02
TREX1-205ENST00000625293 HSPBP1Q9NZL4 362 aa21.45■■□□□ 1.02
TREX1-205ENST00000625293 FARP2O94887 1054 aaPredicted RBP21.44■■□□□ 1.02
TREX1-205ENST00000625293 TRIM49P0CI25 452 aa21.44■■□□□ 1.02
TREX1-205ENST00000625293 TRIM49CP0CI26 452 aa21.44■■□□□ 1.02
TREX1-205ENST00000625293 OSBPP22059 807 aa21.44■■□□□ 1.02
TREX1-205ENST00000625293 SMTNP53814 917 aa21.44■■□□□ 1.02
TREX1-205ENST00000625293 SOX10P56693 466 aa21.44■■□□□ 1.02
TREX1-205ENST00000625293 INTS8Q75QN2 995 aaKnown RBP21.44■■□□□ 1.02
TREX1-205ENST00000625293 RSRC2Q7L4I2 434 aaKnown RBP21.44■■□□□ 1.02
TREX1-205ENST00000625293 DNAJC25-GNG10A0A024R161 153 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 PRKCIP41743 596 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 MAGEA1P43355 309 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 GTF2A2P52657 109 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 SREBF2Q12772 1141 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 IQCEQ6IPM2 695 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 XXYLT1Q8NBI6 393 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 KCNN1Q92952 543 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 KIFC3Q9BVG8 833 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 PCIF1Q9H4Z3 704 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 ATP6V0A4Q9HBG4 840 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 ZNF302Q9NR11 478 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 EXOC7Q9UPT5 735 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 ADGRA3Q8IWK6 1321 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 GSTTP1A0A1W2PQM5 241 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 CCDC169A6NNP5 214 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 TGFB3P10600 412 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 ADSSP30520 456 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 KLHL30Q0D2K2 578 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 SLC18A3Q16572 532 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 PAPD7Q5XG87 772 aaKnown RBP21.43■■□□□ 1.02
TREX1-205ENST00000625293 TRAPPC11Q7Z392 1133 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 PDCL2Q8N4E4 241 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 SECISBP2LQ93073 1101 aaKnown RBP21.43■■□□□ 1.02
TREX1-205ENST00000625293 CEP89Q96ST8 783 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 PCYT2Q99447 389 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 KMT5AQ9NQR1 393 aa21.43■■□□□ 1.02
TREX1-205ENST00000625293 RRP9O43818 475 aaKnown RBP21.42■■□□□ 1.02
TREX1-205ENST00000625293 OATP04181 439 aa21.42■■□□□ 1.02
TREX1-205ENST00000625293 CTCFP49711 727 aaPredicted RBP21.42■■□□□ 1.02
TREX1-205ENST00000625293 SNAPC2Q13487 334 aa21.42■■□□□ 1.02
TREX1-205ENST00000625293 C1orf220Q5T0J3 134 aa21.42■■□□□ 1.02
TREX1-205ENST00000625293 GJB7Q6PEY0 223 aa21.42■■□□□ 1.02
TREX1-205ENST00000625293 ZSWIM2Q8NEG5 633 aa21.42■■□□□ 1.02
TREX1-205ENST00000625293 UBXN4Q92575 508 aa21.42■■□□□ 1.02
TREX1-205ENST00000625293 SPAG5Q96R06 1193 aa21.42■■□□□ 1.02
TREX1-205ENST00000625293 DAAM1Q9Y4D1 1078 aa21.42■■□□□ 1.02
TREX1-205ENST00000625293 DENND3A2RUS2 1198 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 BTBD19C9JJ37 291 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 ANKRD63C9JTQ0 380 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 KRT13P13646 458 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 INHBEP58166 350 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 MYL7Q01449 175 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 NEDD9Q14511 834 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 COL13A1Q5TAT6 717 aaPredicted RBP21.41■■□□□ 1.02
TREX1-205ENST00000625293 SRGAP1Q7Z6B7 1085 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 RDH13Q8NBN7 331 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 LMO3Q8TAP4 145 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 PLEKHO2Q8TD55 490 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 NIFKQ9BYG3 293 aaKnown RBP21.41■■□□□ 1.02
TREX1-205ENST00000625293 INTS2Q9H0H0 1204 aaKnown RBP21.41■■□□□ 1.02
TREX1-205ENST00000625293 BZW2Q9Y6E2 419 aaKnown RBP21.41■■□□□ 1.02
TREX1-205ENST00000625293 ANO9A1A5B4 782 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 MACROD2A1Z1Q3 448 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 P4HA2O15460 535 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 ATP1A1P05023 1023 aaKnown RBP21.41■■□□□ 1.02
TREX1-205ENST00000625293 VAMP7P51809 220 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 DLG4P78352 724 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 WHAMMP3Q1A5X7 153 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 MTERF2Q49AM1 385 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 SLC39A4Q6P5W5 647 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 REM2Q8IYK8 340 aaPredicted RBP21.41■■□□□ 1.02
TREX1-205ENST00000625293 TXLNBQ8N3L3 684 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 CEP112Q8N8E3 955 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 POLR3FQ9H1D9 316 aaPredicted RBP21.41■■□□□ 1.02
TREX1-205ENST00000625293 DHX33Q9H6R0 707 aaKnown RBP21.41■■□□□ 1.02
TREX1-205ENST00000625293 ARHGAP28Q9P2N2 729 aa21.41■■□□□ 1.02
TREX1-205ENST00000625293 A0A087X0T9 212 aa21.4■■□□□ 1.02
TREX1-205ENST00000625293 PMM2O15305 246 aa21.4■■□□□ 1.02
TREX1-205ENST00000625293 PGK2P07205 417 aa21.4■■□□□ 1.02
TREX1-205ENST00000625293 FAM228BP0C875 321 aa21.4■■□□□ 1.02
TREX1-205ENST00000625293 H2AFXP16104 143 aaPredicted RBP21.4■■□□□ 1.02
TREX1-205ENST00000625293 ANXA13P27216 316 aa21.4■■□□□ 1.02
TREX1-205ENST00000625293 ARID5AQ03989 594 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms