RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 FAM105AQ9NUU6 356 aa21.28■■□□□ 1
SMN1-211ENST00000625245 MEIS3P2A8K0S8 358 aa21.27■■□□□ 1
SMN1-211ENST00000625245 M0R2N6 131 aa21.27■■□□□ 1
SMN1-211ENST00000625245 LETM2Q2VYF4 491 aa21.27■■□□□ 1
SMN1-211ENST00000625245 ANO5Q75V66 913 aa21.27■■□□□ 1
SMN1-211ENST00000625245 DAGLBQ8NCG7 672 aa21.27■■□□□ 1
SMN1-211ENST00000625245 KREMEN2Q8NCW0 462 aa21.27■■□□□ 1
SMN1-211ENST00000625245 ZNF274Q96GC6 653 aaPredicted RBP21.27■■□□□ 1
SMN1-211ENST00000625245 MBOAT7Q96N66 472 aa21.27■■□□□ 1
SMN1-211ENST00000625245 JPH2Q9BR39 696 aaPredicted RBP21.27■■□□□ 1
SMN1-211ENST00000625245 ZBP1Q9H171 429 aa21.27■■□□□ 1
SMN1-211ENST00000625245 NRDE2Q9H7Z3 1164 aa21.27■■□□□ 1
SMN1-211ENST00000625245 TBC1D13Q9NVG8 400 aa21.27■■□□□ 1
SMN1-211ENST00000625245 KCNJ14Q9UNX9 436 aa21.27■■□□□ 1
SMN1-211ENST00000625245 C2CD4DB7Z1M9 353 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 EML1O00423 815 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 SLC37A4O43826 429 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 AVPR2P30518 371 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 MTHFRP42898 656 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 NPEPPSP55786 919 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 TCF15Q12870 199 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 GALNT17Q6IS24 598 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 KANK3Q6NY19 840 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 MOXD1Q6UVY6 613 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 KRT25Q7Z3Z0 450 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 DDX53Q86TM3 631 aaKnown RBP21.26■□□□□ 0.99
SMN1-211ENST00000625245 IGSF21Q96ID5 467 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 RIPOR3Q96MK2 946 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 TRAIPQ9BWF2 469 aa21.26■□□□□ 0.99
SMN1-211ENST00000625245 OFD1O75665 1012 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 PDGFBP01127 241 aaPredicted RBP21.25■□□□□ 0.99
SMN1-211ENST00000625245 GALTP07902 379 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 EPCAMP16422 314 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 QARSP47897 775 aaKnown RBP21.25■□□□□ 0.99
SMN1-211ENST00000625245 RAB27AP51159 221 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 POLGP54098 1239 aaPredicted RBP21.25■□□□□ 0.99
SMN1-211ENST00000625245 NPY5RQ15761 445 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 RSPH1Q8WYR4 309 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 PGBD4Q96DM1 585 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 CYP26B1Q9NR63 512 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 PCDHB2Q9Y5E7 798 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 COL4A3BPQ9Y5P4 624 aa21.25■□□□□ 0.99
SMN1-211ENST00000625245 CCDC194A0A1B0GVG4 234 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 CARNS1A5YM72 827 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 ZNF623O75123 536 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 SRGAP2CP0DJJ0 459 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 CTSAP10619 480 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 GIT2Q14161 759 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 ATAT1Q5SQI0 421 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 URGCPQ8TCY9 931 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 BCL7CQ8WUZ0 217 aaPredicted RBP21.24■□□□□ 0.99
SMN1-211ENST00000625245 SLC7A3Q8WY07 619 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 CEP170P1Q96L14 293 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 BMP2KQ9NSY1 1161 aaPredicted RBP21.24■□□□□ 0.99
SMN1-211ENST00000625245 FAM86C1Q9NVL1 165 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 DZANK1Q9NVP4 752 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 DNAJB4Q9UDY4 337 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 SORCS3Q9UPU3 1222 aa21.24■□□□□ 0.99
SMN1-211ENST00000625245 SPDYE4A6NLX3 237 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 MARCH6O60337 910 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 DKC1O60832 514 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMN1-211ENST00000625245 SLC11A1P49279 550 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 PPP2R5CQ13362 524 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 MTMR3Q13615 1198 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 ZNF280BQ86YH2 543 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 FAM177A1Q8N128 213 aaPredicted RBP21.23■□□□□ 0.99
SMN1-211ENST00000625245 ZNF579Q8NAF0 562 aaKnown RBP21.23■□□□□ 0.99
SMN1-211ENST00000625245 PRPF31Q8WWY3 499 aaKnown RBP21.23■□□□□ 0.99
SMN1-211ENST00000625245 TMEM143Q96AN5 459 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 FAM20AQ96MK3 541 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 IFT122Q9HBG6 1241 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 PDRG1Q9NUG6 133 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 DBR1Q9UK59 544 aaKnown RBP21.23■□□□□ 0.99
SMN1-211ENST00000625245 VAV3Q9UKW4 847 aa21.23■□□□□ 0.99
SMN1-211ENST00000625245 BRD1O95696 1058 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 SSBP05455 408 aaKnown RBP eCLIP21.22■□□□□ 0.99
SMN1-211ENST00000625245 P4HBP07237 508 aaKnown RBP21.22■□□□□ 0.99
SMN1-211ENST00000625245 ASGR2P07307 311 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 NEK8Q86SG6 692 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 CABP7Q86V35 215 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 UBALD2Q8IYN6 164 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 TDRD5Q8NAT2 981 aaKnown RBP21.22■□□□□ 0.99
SMN1-211ENST00000625245 SLC22A17Q8WUG5 538 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 ATOH1Q92858 354 aaPredicted RBP21.22■□□□□ 0.99
SMN1-211ENST00000625245 FAM193BQ96PV7 902 aaPredicted RBP21.22■□□□□ 0.99
SMN1-211ENST00000625245 AGPAT5Q9NUQ2 364 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 LIMD1Q9UGP4 676 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 IRAK3Q9Y616 596 aa21.22■□□□□ 0.99
SMN1-211ENST00000625245 B4GALT3O60512 393 aa21.21■□□□□ 0.99
SMN1-211ENST00000625245 CCNT1O60563 726 aaKnown RBP21.21■□□□□ 0.99
SMN1-211ENST00000625245 KIAA1841Q6NSI8 718 aa21.21■□□□□ 0.99
SMN1-211ENST00000625245 TMC5Q6UXY8 1006 aa21.21■□□□□ 0.99
SMN1-211ENST00000625245 AGMOQ6ZNB7 445 aa21.21■□□□□ 0.99
SMN1-211ENST00000625245 EXOC8Q8IYI6 725 aa21.21■□□□□ 0.99
SMN1-211ENST00000625245 PSPC1Q8WXF1 523 aaKnown RBP21.21■□□□□ 0.99
SMN1-211ENST00000625245 TM6SF1Q9BZW5 370 aa21.21■□□□□ 0.99
SMN1-211ENST00000625245 SMOC2Q9H3U7 446 aa21.21■□□□□ 0.99
SMN1-211ENST00000625245 KCNMB3Q9NPA1 279 aa21.21■□□□□ 0.99
SMN1-211ENST00000625245 WRAP73Q9P2S5 460 aaPredicted RBP21.21■□□□□ 0.99
SMN1-211ENST00000625245 DTNBO60941 627 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms