RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 ABI1Q8IZP0 508 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 CNNM3Q8NE01 707 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 PIGOQ8TEQ8 1089 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 PPM1EQ8WY54 764 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 PPP2R3CQ969Q6 453 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 SNX21Q969T3 373 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 PRIMPOLQ96LW4 560 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 ASB2Q96Q27 587 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 NSUN3Q9H649 340 aaKnown RBP13.82□□□□□ -0.2
LINC00963-217ENST00000624009 FAM105AQ9NUU6 356 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 RNF19AQ9NV58 838 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 PIN4Q9Y237 131 aaKnown RBP13.82□□□□□ -0.2
LINC00963-217ENST00000624009 LZTS1Q9Y250 596 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 CNTNAP2Q9UHC6 1331 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 ZMYM2Q9UBW7 1377 aa13.82□□□□□ -0.2
LINC00963-217ENST00000624009 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 CSDE1O75534 798 aaKnown RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 ERLIN2O94905 339 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 ATF7P17544 494 aaPredicted RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 HOXA11P31270 313 aaPredicted RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 CCT6AP40227 531 aaKnown RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 CAPSQ13938 189 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 NBR1Q14596 966 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 HYIQ5T013 277 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 CDCA2Q69YH5 1023 aaPredicted RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 PDE12Q6L8Q7 609 aaKnown RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 POTEGQ6S5H5 508 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 PADI6Q6TGC4 694 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 MRPL10Q7Z7H8 261 aaKnown RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 MICALL1Q8N3F8 863 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 SPPL3Q8TCT6 385 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 PGBD4Q96DM1 585 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 ZNF668Q96K58 619 aaPredicted RBP13.81□□□□□ -0.2
LINC00963-217ENST00000624009 AK8Q96MA6 479 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 NT5C3AQ9H0P0 336 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 CWH43Q9H720 699 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 MINDY3Q9H8M7 445 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 UBN1Q9NPG3 1134 aa13.81□□□□□ -0.2
LINC00963-217ENST00000624009 TRIP11Q15643 1979 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 ARHGEF35A5YM69 484 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 RBAK-RBAKDNI3L0D1 243 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 K7ELQ4 463 aaPredicted RBP13.8□□□□□ -0.2
LINC00963-217ENST00000624009 INPPL1O15357 1258 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 USO1O60763 962 aaKnown RBP13.8□□□□□ -0.2
LINC00963-217ENST00000624009 ITGB1P05556 798 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 FGFR1P11362 822 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 FGFR4P22455 802 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 GLRA2P23416 452 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 PLCB3Q01970 1234 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 MBTD1Q05BQ5 628 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 FAM187BQ17R55 369 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 CLLU1OSQ5K130 101 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 NOTUMQ6P988 496 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 KLHL23Q8NBE8 558 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 ASAP3Q8TDY4 903 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 SNX29Q8TEQ0 813 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 KIFAP3Q92845 792 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 TIPINQ9BVW5 301 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 C2orf40Q9H1Z8 148 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 TYW1Q9NV66 732 aaKnown RBP13.8□□□□□ -0.2
LINC00963-217ENST00000624009 KANSL3Q9P2N6 904 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 STK39Q9UEW8 545 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 DNM3Q9UQ16 869 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 MORC2Q9Y6X9 1032 aaPredicted RBP13.8□□□□□ -0.2
LINC00963-217ENST00000624009 MYH15Q9Y2K3 1946 aa13.8□□□□□ -0.2
LINC00963-217ENST00000624009 C5orf42Q9H799 3197 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 DLL1O00548 723 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 GRM6O15303 877 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 EYA4O95677 639 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 NCLP19338 710 aaKnown RBP13.79□□□□□ -0.2
LINC00963-217ENST00000624009 NAMPTP43490 491 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 GATMP50440 423 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 CAMK1Q14012 370 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 SKIV2LQ15477 1246 aaKnown RBP13.79□□□□□ -0.2
LINC00963-217ENST00000624009 AMHR2Q16671 573 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 PUS10Q3MIT2 529 aaKnown RBP13.79□□□□□ -0.2
LINC00963-217ENST00000624009 PAN2Q504Q3 1202 aaKnown RBP13.79□□□□□ -0.2
LINC00963-217ENST00000624009 GLB1LQ6UWU2 654 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 COLGALT1Q8NBJ5 622 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 PABPC5Q96DU9 382 aaKnown RBP13.79□□□□□ -0.2
LINC00963-217ENST00000624009 POLR3FQ9H1D9 316 aaPredicted RBP13.79□□□□□ -0.2
LINC00963-217ENST00000624009 C17orf75Q9HAS0 396 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 PRDM6Q9NQX0 595 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
LINC00963-217ENST00000624009 PRMT7Q9NVM4 692 aaPredicted RBP13.79□□□□□ -0.2
LINC00963-217ENST00000624009 KCND2Q9NZV8 630 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 KCNG1Q9UIX4 513 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 PCDHB2Q9Y5E7 798 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 PHLPP2Q6ZVD8 1323 aa13.79□□□□□ -0.2
LINC00963-217ENST00000624009 CITO14578 2027 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 INO80B-WBP1J3KQ70 363 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 TSPAN1O60635 241 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 EFNA5P52803 228 aa13.78□□□□□ -0.2
LINC00963-217ENST00000624009 IL17AQ16552 155 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms