RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TNFAIP3P21580 790 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 SFNP31947 248 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 PSMC5P62195 406 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 DLG4P78352 724 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 R3HDM1Q15032 1099 aaKnown RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 RNF207Q6ZRF8 634 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 HAUS6Q7Z4H7 955 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 NT5DC3Q86UY8 548 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 KLHL7Q8IXQ5 586 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 XXYLT1Q8NBI6 393 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 TSEN2Q8NCE0 465 aaKnown RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 SLC17A8Q8NDX2 589 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 FBXO41Q8TF61 875 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 CASKIN2Q8WXE0 1202 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 IFT81Q8WYA0 676 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 RFFLQ8WZ73 363 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 TRERF1Q96PN7 1200 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 RMDN3Q96TC7 470 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 SH3GL2Q99962 352 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 CBWD1Q9BRT8 395 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 TAOK3Q9H2K8 898 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 RPAP3Q9H6T3 665 aaPredicted RBP9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 PXMP2Q9NR77 195 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 HSPBP1Q9NZL4 362 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 TCEAL9Q9UHQ7 104 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 AMFRQ9UKV5 643 aa9.03□□□□□ -0.96
SND1-IT1-201ENST00000623342 FER1L6Q2WGJ9 1857 aa9.02□□□□□ -0.96
SND1-IT1-201ENST00000623342 ESYT3A0FGR9 886 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 GOLGA6CA6NDK9 693 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 ZSCAN5CA6NGD5 496 aaPredicted RBP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 WDR64B1ANS9 1081 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 FOXN3O00409 490 aaPredicted RBP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 BACH1O14867 736 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 GOLGA6DP0CG33 693 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 KRT76Q01546 638 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 MTMR2Q13614 643 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 UGCGQ16739 394 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 PTPROQ16827 1216 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 ARHGEF16Q5VV41 709 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 RASGEF1CQ8N431 466 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 FAM76AQ8TAV0 307 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 SLC35G2Q8TBE7 412 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 HES6Q96HZ4 224 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 RUFY1Q96T51 708 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 PDCD2LQ9BRP1 358 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 UBE2TQ9NPD8 197 aaPredicted RBP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 ANKEF1Q9NU02 776 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 GOLGA6AQ9NYA3 693 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 CWC15Q9P013 229 aaKnown RBP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 NOC2LQ9Y3T9 749 aaKnown RBP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 CCDC188H7C350 402 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 ATP9AO75110 1047 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 LRRN2O75325 713 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 RPS12P25398 132 aaKnown RBP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 NCKAP1LP55160 1127 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 PEX3P56589 373 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 TGFB2P61812 414 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 PPP3CAQ08209 521 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 PPFIA1Q13136 1202 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 EPC2Q52LR7 807 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 MREGQ8N565 214 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 EIF1ADQ8N9N8 165 aaKnown RBP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 WHAMMQ8TF30 809 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 AGPAT1Q99943 283 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 SH2D3AQ9BRG2 576 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 PLEKHA4Q9H4M7 779 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 OSGEPQ9NPF4 335 aa9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 SEPT11Q9NVA2 429 aaKnown RBP9.02□□□□□ -0.97
SND1-IT1-201ENST00000623342 BRCA1P38398 1863 aaKnown RBP9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 TESPA1A2RU30 521 aaPredicted RBP9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 TMEM150BA6NC51 233 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 ANKRD62A6NC57 917 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 VWA5AO00534 786 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 SLC16A4O15374 487 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 BUB1BO60566 1050 aaPredicted RBP9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 CCNE2O96020 404 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 IVLP07476 585 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 FAM153BP0C7A2 387 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 ABCB4P21439 1286 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 GCLMP48507 274 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 PPATQ06203 517 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 SF3B2Q13435 895 aaKnown RBP9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 FAM153CQ494X1 144 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 DALRD3Q5D0E6 543 aaKnown RBP9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 XKR9Q5GH70 373 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 C1orf220Q5T0J3 134 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 FAM102BQ5T8I3 360 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 XRRA1Q6P2D8 792 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 NSMFQ6X4W1 530 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 RDM1Q8NG50 284 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 ISCUQ9H1K1 167 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 TAF1DQ9H5J8 278 aaPredicted RBP9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 GPRC5CQ9NQ84 441 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 FAM153AQ9UHL3 310 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 EXOC7Q9UPT5 735 aa9.01□□□□□ -0.97
SND1-IT1-201ENST00000623342 KRIT1O00522 736 aa9□□□□□ -0.97
SND1-IT1-201ENST00000623342 PMM2O15305 246 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms