RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 SMIM35A0A1B0GVV1 85 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 DENND3A2RUS2 1198 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 MBLAC1A4D2B0 266 aaPredicted RBP6.59□□□□□ -1.35
LINC00963-215ENST00000622972 TMEM150BA6NC51 233 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 PP2D1A8MPX8 630 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 ZBTB42B2RXF5 422 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 IPO5O00410 1097 aaKnown RBP6.59□□□□□ -1.35
LINC00963-215ENST00000622972 ZNF862O60290 1169 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 BRD1O95696 1058 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 RB1P06400 928 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 ATP2B1P20020 1258 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 MCM7P33993 719 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 BMPR1AP36894 532 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 SLC26A2P50443 739 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 USP11P51784 963 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 SETQ01105 290 aaPredicted RBP6.59□□□□□ -1.35
LINC00963-215ENST00000622972 ZNF174Q15697 407 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 TMEM266Q2M3C6 531 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 LEXMQ3ZCV2 418 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 TTC38Q5R3I4 469 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 ODR4Q5SWX8 454 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 MARCH8Q5T0T0 291 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 PPP4R3AQ6IN85 833 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 SWSAP1Q6NVH7 229 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 MTHFD1LQ6UB35 978 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 MOXD1Q6UVY6 613 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 ZBTB33Q86T24 672 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 CCDC60Q8IWA6 550 aaPredicted RBP6.59□□□□□ -1.35
LINC00963-215ENST00000622972 NME8Q8N427 588 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 METTL13Q8N6R0 699 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 EHBP1Q8NDI1 1231 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 BICD2Q8TD16 824 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 FOXJ1Q92949 421 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 PPP2R3CQ969Q6 453 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 SCLT1Q96NL6 688 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 USP28Q96RU2 1077 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 FTHL17Q9BXU8 183 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 CELF4Q9BZC1 486 aaKnown RBP6.59□□□□□ -1.35
LINC00963-215ENST00000622972 EPHX3Q9H6B9 360 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 AGO3Q9H9G7 860 aaKnown RBP6.59□□□□□ -1.35
LINC00963-215ENST00000622972 TBC1D22BQ9NU19 505 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 DDX25Q9UHL0 483 aaKnown RBP6.59□□□□□ -1.35
LINC00963-215ENST00000622972 RAPGEFL1Q9UHV5 662 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 PADI3Q9ULW8 664 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 PCDHA2Q9Y5H9 948 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 CLIC4Q9Y696 253 aa6.59□□□□□ -1.35
LINC00963-215ENST00000622972 RALGAPA2Q2PPJ7 1873 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 IGSF9BQ9UPX0 1349 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 IGKV6D-21A0A0A0MT36 114 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 CHMP2AO43633 222 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 CCNT1O60563 726 aaKnown RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 RPS6KA5O75582 802 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 ATG7O95352 703 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 F13A1P00488 732 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 PSAPP07602 524 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 ZSCAN22P10073 491 aaPredicted RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 IL9P15248 144 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 VARSP26640 1264 aaKnown RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 TMOD1P28289 359 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 SKOR1P84550 965 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 FOXC1Q12948 553 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 CLUL1Q15846 466 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 ECM1Q16610 540 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 FOXD4L6Q3SYB3 417 aaPredicted RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 ZNF484Q5JVG2 852 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 TMEM31Q5JXX7 168 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 MCTP1Q6DN14 999 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 ABHD15Q6UXT9 468 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 FOXD4L3Q6VB84 417 aaPredicted RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 USP49Q70CQ1 688 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 NPAS4Q8IUM7 802 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 GJD3Q8N144 294 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 MICAL1Q8TDZ2 1067 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 ATP8B4Q8TF62 1192 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 PABPC5Q96DU9 382 aaKnown RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 CEP89Q96ST8 783 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 MAP7D2Q96T17 732 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 MMTAG2Q9BU76 263 aaKnown RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 LMAN2LQ9H0V9 348 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 ALG13Q9NP73 1137 aaKnown RBP6.58□□□□□ -1.36
LINC00963-215ENST00000622972 GABBR1Q9UBS5 961 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 CEP131Q9UPN4 1083 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 AKT3Q9Y243 479 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 HCN4Q9Y3Q4 1203 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 PCDHB7Q9Y5E2 793 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 SQORQ9Y6N5 450 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 COL4A6Q14031 1691 aa6.58□□□□□ -1.36
LINC00963-215ENST00000622972 CUL9Q8IWT3 2517 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 COL1A2P08123 1366 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 KIAA1671Q9BY89 1806 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 A0A0C4DFX4 3053 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 UNC80Q8N2C7 3258 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 ATG2AQ2TAZ0 1938 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 A0A087WWV3 80 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 FAM86C2PA6NEL3 165 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 WDR64B1ANS9 1081 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 H3BQV1 296 aa6.57□□□□□ -1.36
LINC00963-215ENST00000622972 ZBTB39O15060 712 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms