RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 KLHL11Q9NVR0 708 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 ARL4AP40617 200 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 RPS6KC1Q96S38 1066 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 AGPAT1Q99943 283 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 FAM49AQ9H0Q0 323 aaPredicted RBP17.27■□□□□ 0.36
GABRB3-215ENST00000622697 HEY1Q9Y5J3 304 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.27■□□□□ 0.36
GABRB3-215ENST00000622697 PALM3A6NDB9 673 aaPredicted RBP17.27■□□□□ 0.36
GABRB3-215ENST00000622697 NDUFB10O96000 172 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 ACTN3Q08043 901 aaPredicted RBP17.27■□□□□ 0.36
GABRB3-215ENST00000622697 ASPHQ12797 758 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 SP8Q8IXZ3 490 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 WRNIP1Q96S55 665 aa17.27■□□□□ 0.36
GABRB3-215ENST00000622697 TPX2Q9ULW0 747 aaKnown RBP17.27■□□□□ 0.36
GABRB3-215ENST00000622697 H0Y3Z8 333 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 CASQ2O14958 399 aaPredicted RBP17.27■□□□□ 0.35
GABRB3-215ENST00000622697 CHRNA5P30532 468 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 CEP55Q53EZ4 464 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 GJB7Q6PEY0 223 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 DDX42Q86XP3 938 aaKnown RBP eCLIP17.27■□□□□ 0.35
GABRB3-215ENST00000622697 JMJD4Q9H9V9 463 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 HPCAL4Q9UM19 191 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 PDS5AQ29RF7 1337 aaKnown RBP17.27■□□□□ 0.35
GABRB3-215ENST00000622697 TRIM66O15016 1216 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 SLC37A4O43826 429 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 MMEL1Q495T6 779 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 ZNF667Q5HYK9 610 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 EPM2AIP1Q7L775 607 aaPredicted RBP17.27■□□□□ 0.35
GABRB3-215ENST00000622697 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 TXLNGQ9NUQ3 528 aa17.27■□□□□ 0.35
GABRB3-215ENST00000622697 CDC42EP5Q6NZY7 148 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 PCGF5Q86SE9 256 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 MCPH1Q8NEM0 835 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 DIP2BQ9P265 1576 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 GNA15P30679 374 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 BRAFP15056 766 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 DEPDC1BQ8WUY9 529 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 HVCN1Q96D96 273 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 POLR3FQ9H1D9 316 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-215ENST00000622697 SLC5A4Q9NY91 659 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 SEL1LQ9UBV2 794 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 EVI5O60447 810 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
GABRB3-215ENST00000622697 CHRNA3P32297 505 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 CARSP49589 748 aaKnown RBP17.26■□□□□ 0.35
GABRB3-215ENST00000622697 TMCO4Q5TGY1 634 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 OR6B3Q8NGW1 331 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 PXDNQ92626 1479 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 TAF11Q15544 211 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 ZNF699Q32M78 642 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 GSDMBQ8TAX9 411 aa17.26■□□□□ 0.35
GABRB3-215ENST00000622697 PSMD14O00487 310 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 SPAG7O75391 227 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 KLRC1P26715 233 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 NCAPHQ15003 741 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 DPY19L2Q6NUT2 758 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 TMEM35BQ8NCS4 154 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 AFF2P51816 1311 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 KRT76Q01546 638 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 GPS1Q13098 491 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
GABRB3-215ENST00000622697 LRRN4CLQ8ND94 238 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 N4BP2L2Q92802 583 aaPredicted RBP17.25■□□□□ 0.35
GABRB3-215ENST00000622697 EDEM3Q9BZQ6 932 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 LDHAP00338 332 aaKnown RBP17.25■□□□□ 0.35
GABRB3-215ENST00000622697 SLC4A1P02730 911 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 NCF2P19878 526 aaPredicted RBP17.25■□□□□ 0.35
GABRB3-215ENST00000622697 MYO1EQ12965 1108 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 NTRK3Q16288 839 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 PSMC5P62195 406 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 STXBP2Q15833 593 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 RASIP1Q5U651 963 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 RSRC2Q7L4I2 434 aaKnown RBP17.25■□□□□ 0.35
GABRB3-215ENST00000622697 LRRC4Q9HBW1 653 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 DCTN4Q9UJW0 460 aa17.25■□□□□ 0.35
GABRB3-215ENST00000622697 GPC4O75487 556 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 ESRRAP11474 423 aaPredicted RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 SEMA3FQ13275 785 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 SPARCL1Q14515 664 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 SLITRK6Q9H5Y7 841 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 MEGF6O75095 1541 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 RAD51CO43502 376 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 YWHABP31946 246 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 DALRD3Q5D0E6 543 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 SPOUT1Q5T280 376 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 PPP1R2P3Q6NXS1 205 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 PRPF38AQ8NAV1 312 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 MTRQ99707 1265 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 SSU72P8A0A1W2PR75 194 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 MAPK13O15264 365 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 ADRA2BP18089 450 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 EPHA7Q15375 998 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 SYCP2LQ5T4T6 812 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 MMS22LQ6ZRQ5 1243 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 NSUN6Q8TEA1 469 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 HDAC11Q96DB2 347 aa17.24■□□□□ 0.35
GABRB3-215ENST00000622697 CELF4Q9BZC1 486 aaKnown RBP17.24■□□□□ 0.35
GABRB3-215ENST00000622697 SPC25Q9HBM1 224 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms