RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	C12orf76	Q8N812	135 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	RNF149	Q8NC42	400 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	WASF1	Q92558	559 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZNF689	Q96CS4	500 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	TMX3	Q96JJ7	454 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZFP42	Q96MM3	310 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	CASD1	Q96PB1	797 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	MTR	Q99707	1265 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	INO80B	Q9C086	356 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	RNF39	Q9H2S5	420 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	NXF3	Q9H4D5	531 aa	Known RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	NSUN3	Q9H649	340 aa	Known RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	EPHX3	Q9H6B9	360 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	CWH43	Q9H720	699 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	IFT122	Q9HBG6	1241 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	ENTPD7	Q9NQZ7	604 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	RGS18	Q9NS28	235 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	PLAGL2	Q9UPG8	496 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	CEP131	Q9UPN4	1083 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZNF318	Q5VUA4	2279 aa		4.98	□□□□□ -1.61
LINC00649-219	ENST00000622171	SCN1A	P35498	2009 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	KMT2E	Q8IZD2	1858 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171		E9PMD0	336 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	GPR182	O15218	404 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	MAGEB2	O15479	319 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	EPB41L2	O43491	1005 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	TSPAN1	O60635	241 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	BAG4	O95429	457 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	P4HB	P07237	508 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	STAG3L1	P0CL83	205 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SPATA31C1	P0DKV0	1188 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	GCFC2	P16383	781 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SFPQ	P23246	707 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	GLRA2	P23416	452 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	IGFBP6	P24592	240 aa	Predicted RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	LTBR	P36941	435 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	MLH1	P40692	756 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	PHKA2	P46019	1235 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SLC11A1	P49279	550 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	DNM2	P50570	870 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SCNN1G	P51170	649 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	OSTN	P61366	133 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	CEBPZ	Q03701	1054 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	RNASEL	Q05823	741 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	RABEP1	Q15276	862 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SAFB	Q15424	915 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	IL17A	Q16552	155 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	PTPRO	Q16827	1216 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	TIGD5	Q53EQ6	642 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	GLRA4	Q5JXX5	417 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SPECC1	Q5M775	1068 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	UBXN11	Q5T124	520 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	EEF1DP3	Q658K8	133 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	MCTP2	Q6DN12	878 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	PPP4R3A	Q6IN85	833 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	GALNT17	Q6IS24	598 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	KCNT2	Q6UVM3	1135 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	MOXD1	Q6UVY6	613 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SLC24A5	Q71RS6	500 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	KCNK18	Q7Z418	384 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	CATSPER3	Q86XQ3	398 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZNF280B	Q86YH2	543 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	NOSTRIN	Q8IVI9	506 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	CRIPAK	Q8N1N5	446 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	NME8	Q8N427	588 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SPPL3	Q8TCT6	385 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SNX29	Q8TEQ0	813 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	PSPC1	Q8WXF1	523 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SLC7A3	Q8WY07	619 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	CLP1	Q92989	425 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	CHAMP1	Q96JM3	812 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	FAM20A	Q96MK3	541 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	MTMR9	Q96QG7	549 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	TCF25	Q9BQ70	676 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	RUSC1	Q9BVN2	902 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	VN1R3	Q9BXE9	311 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	FTHL17	Q9BXU8	183 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	NIFK	Q9BYG3	293 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	SMOC2	Q9H3U7	446 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	TSHZ2	Q9NRE2	1034 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	FAM105A	Q9NUU6	356 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	DDX19A	Q9NUU7	478 aa	Known RBP	4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	TBC1D13	Q9NVG8	400 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	TMEM161A	Q9NX61	479 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	PCDHA12	Q9UN75	941 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	PCDHB2	Q9Y5E7	798 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	GTF3C3	Q9Y5Q9	886 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	NOTCH4	Q99466	2003 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	TSC2	P49815	1807 aa		4.97	□□□□□ -1.61
LINC00649-219	ENST00000622171	ATG2B	Q96BY7	2078 aa		4.96	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZNF638	Q14966	1978 aa	Known RBP	4.96	□□□□□ -1.61
LINC00649-219	ENST00000622171	KIF26A	Q9ULI4	1882 aa	Predicted RBP	4.96	□□□□□ -1.61
LINC00649-219	ENST00000622171	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	4.96	□□□□□ -1.62
LINC00649-219	ENST00000622171	IGKV6-21	A0A0C4DH24	114 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms