RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 IFT122Q9HBG6 1241 aa26.82■■□□□ 1.88
ATXN3-253ENST00000621269 NGRNQ9NPE2 291 aaKnown RBP26.82■■□□□ 1.88
ATXN3-253ENST00000621269 BMP2KQ9NSY1 1161 aaPredicted RBP26.82■■□□□ 1.88
ATXN3-253ENST00000621269 BARX2Q9UMQ3 279 aaPredicted RBP26.82■■□□□ 1.88
ATXN3-253ENST00000621269 FAM86C2PA6NEL3 165 aa26.81■■□□□ 1.88
ATXN3-253ENST00000621269 GLP2RO95838 553 aa26.81■■□□□ 1.88
ATXN3-253ENST00000621269 ALDH7A1P49419 539 aaKnown RBP26.81■■□□□ 1.88
ATXN3-253ENST00000621269 LAMTOR4Q0VGL1 99 aa26.81■■□□□ 1.88
ATXN3-253ENST00000621269 EMC2Q15006 297 aa26.81■■□□□ 1.88
ATXN3-253ENST00000621269 DUSP6Q16828 381 aa26.81■■□□□ 1.88
ATXN3-253ENST00000621269 SRGAP1Q7Z6B7 1085 aa26.81■■□□□ 1.88
ATXN3-253ENST00000621269 FAM105AQ9NUU6 356 aa26.81■■□□□ 1.88
ATXN3-253ENST00000621269 MYO7AQ13402 2215 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 ASAP2O43150 1006 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 NEMFO60524 1076 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 SLITRK3O94933 977 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 CENPBP07199 599 aaPredicted RBP26.8■■□□□ 1.88
ATXN3-253ENST00000621269 SRGAP2BP0DMP2 458 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 TXKP42681 527 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 SAFBQ15424 915 aaKnown RBP eCLIP26.8■■□□□ 1.88
ATXN3-253ENST00000621269 LONRF3Q496Y0 759 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 GLB1LQ6UWU2 654 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 TMC7Q7Z402 723 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 SMRP1Q8NCR6 262 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 LPPQ93052 612 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 EIF2AK1Q9BQI3 630 aaKnown RBP26.8■■□□□ 1.88
ATXN3-253ENST00000621269 TTC12Q9H892 705 aaPredicted RBP26.8■■□□□ 1.88
ATXN3-253ENST00000621269 LIMCH1Q9UPQ0 1083 aa26.8■■□□□ 1.88
ATXN3-253ENST00000621269 ZBTB39O15060 712 aa26.79■■□□□ 1.88
ATXN3-253ENST00000621269 DCXO43602 365 aa26.79■■□□□ 1.88
ATXN3-253ENST00000621269 BCAR1P56945 870 aa26.79■■□□□ 1.88
ATXN3-253ENST00000621269 SLC39A11Q8N1S5 342 aa26.79■■□□□ 1.88
ATXN3-253ENST00000621269 PGBD4Q96DM1 585 aa26.79■■□□□ 1.88
ATXN3-253ENST00000621269 MTRQ99707 1265 aa26.79■■□□□ 1.88
ATXN3-253ENST00000621269 C11orf16Q9NQ32 467 aa26.79■■□□□ 1.88
ATXN3-253ENST00000621269 AGPAT5Q9NUQ2 364 aa26.79■■□□□ 1.88
ATXN3-253ENST00000621269 ZNF623O75123 536 aa26.78■■□□□ 1.88
ATXN3-253ENST00000621269 RNF149Q8NC42 400 aa26.78■■□□□ 1.88
ATXN3-253ENST00000621269 CCDC43Q96MW1 224 aaKnown RBP26.78■■□□□ 1.88
ATXN3-253ENST00000621269 CARNS1A5YM72 827 aa26.77■■□□□ 1.88
ATXN3-253ENST00000621269 RBM10P98175 930 aaKnown RBP26.77■■□□□ 1.88
ATXN3-253ENST00000621269 BMS1Q14692 1282 aaKnown RBP26.77■■□□□ 1.88
ATXN3-253ENST00000621269 NOMO2Q5JPE7 1267 aa26.77■■□□□ 1.88
ATXN3-253ENST00000621269 FERMT3Q86UX7 667 aa26.77■■□□□ 1.88
ATXN3-253ENST00000621269 HSD17B14Q9BPX1 270 aa26.77■■□□□ 1.88
ATXN3-253ENST00000621269 INPP5FQ9Y2H2 1132 aa26.77■■□□□ 1.88
ATXN3-253ENST00000621269 HCN4Q9Y3Q4 1203 aa26.77■■□□□ 1.88
ATXN3-253ENST00000621269 PCDHB2Q9Y5E7 798 aa26.77■■□□□ 1.88
ATXN3-253ENST00000621269 HIDE1A8MVS5 230 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 NT5C1B-RDH14C9J2C7 533 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 ZC3H11AO75152 810 aaKnown RBP eCLIP26.76■■□□□ 1.87
ATXN3-253ENST00000621269 LYPLA2O95372 231 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 ATP2B1P20020 1258 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 RNASELQ05823 741 aaKnown RBP26.76■■□□□ 1.87
ATXN3-253ENST00000621269 ST3GAL1Q11201 340 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 MXD4Q14582 209 aaPredicted RBP26.76■■□□□ 1.87
ATXN3-253ENST00000621269 SMC1AQ14683 1233 aaKnown RBP26.76■■□□□ 1.87
ATXN3-253ENST00000621269 VN1R2Q8NFZ6 395 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 TMEM169Q96HH4 297 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 MINDY3Q9H8M7 445 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 ANKEF1Q9NU02 776 aa26.76■■□□□ 1.87
ATXN3-253ENST00000621269 USP15Q9Y4E8 981 aaPredicted RBP26.76■■□□□ 1.87
ATXN3-253ENST00000621269 PRR33A8MZF0 331 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 OFD1O75665 1012 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 ERLIN2O94905 339 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 CA8P35219 290 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 GUCY1B3Q02153 619 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 LLGL2Q6P1M3 1020 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 CCDC83Q8IWF9 413 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 MTMR9Q96QG7 549 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 TBC1D13Q9NVG8 400 aa26.75■■□□□ 1.87
ATXN3-253ENST00000621269 MEIS3P2A8K0S8 358 aa26.74■■□□□ 1.87
ATXN3-253ENST00000621269 WNT7AO00755 349 aa26.74■■□□□ 1.87
ATXN3-253ENST00000621269 DGAT1O75907 488 aa26.74■■□□□ 1.87
ATXN3-253ENST00000621269 TECP42680 631 aa26.74■■□□□ 1.87
ATXN3-253ENST00000621269 NCBP1Q09161 790 aaKnown RBP26.74■■□□□ 1.87
ATXN3-253ENST00000621269 TFDP1Q14186 410 aa26.74■■□□□ 1.87
ATXN3-253ENST00000621269 TMEM184AQ6ZMB5 413 aa26.74■■□□□ 1.87
ATXN3-253ENST00000621269 MRPL43Q8N983 215 aaKnown RBP26.74■■□□□ 1.87
ATXN3-253ENST00000621269 URGCPQ8TCY9 931 aa26.74■■□□□ 1.87
ATXN3-253ENST00000621269 C8orf76Q96K31 380 aa26.74■■□□□ 1.87
ATXN3-253ENST00000621269 LLPHQ9BRT6 129 aaKnown RBP26.74■■□□□ 1.87
ATXN3-253ENST00000621269 MCM7P33993 719 aa26.73■■□□□ 1.87
ATXN3-253ENST00000621269 PCBP1Q15365 356 aaKnown RBP eCLIP26.73■■□□□ 1.87
ATXN3-253ENST00000621269 MRPL10Q7Z7H8 261 aaKnown RBP26.73■■□□□ 1.87
ATXN3-253ENST00000621269 RNF135Q8IUD6 432 aa26.73■■□□□ 1.87
ATXN3-253ENST00000621269 ZSCAN31Q96LW9 406 aaPredicted RBP26.73■■□□□ 1.87
ATXN3-253ENST00000621269 GBP3Q9H0R5 595 aa26.73■■□□□ 1.87
ATXN3-253ENST00000621269 NRDE2Q9H7Z3 1164 aa26.73■■□□□ 1.87
ATXN3-253ENST00000621269 XPNPEP1Q9NQW7 623 aa26.73■■□□□ 1.87
ATXN3-253ENST00000621269 CXCL14O95715 111 aa26.72■■□□□ 1.87
ATXN3-253ENST00000621269 HOXA11P31270 313 aaPredicted RBP26.72■■□□□ 1.87
ATXN3-253ENST00000621269 KCNC3Q14003 757 aa26.72■■□□□ 1.87
ATXN3-253ENST00000621269 ANKRD54Q6NXT1 300 aa26.72■■□□□ 1.87
ATXN3-253ENST00000621269 TMEM87AQ8NBN3 555 aa26.72■■□□□ 1.87
ATXN3-253ENST00000621269 CNTNAP2Q9UHC6 1331 aa26.71■■□□□ 1.87
ATXN3-253ENST00000621269 C2orf71A6NGG8 1288 aa26.71■■□□□ 1.87
ATXN3-253ENST00000621269 XRCC6P12956 609 aaKnown RBP eCLIP26.71■■□□□ 1.87
ATXN3-253ENST00000621269 AXLP30530 894 aa26.71■■□□□ 1.87
ATXN3-253ENST00000621269 PTENP60484 403 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms