RNA–Protein interactions for RNA: ENST00000621176.1

TRIM6-212, Transcript of tripartite motif containing 6, humanhuman

TSL 5 BASIC

Gene TRIM6, Length 3,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-212ENST00000621176 RDH13Q8NBN7 331 aa9.48□□□□□ -0.89
TRIM6-212ENST00000621176 EPS8L3Q8TE67 593 aaKnown RBP9.48□□□□□ -0.89
TRIM6-212ENST00000621176 P3H4Q92791 437 aa9.48□□□□□ -0.89
TRIM6-212ENST00000621176 NAP1L3Q99457 506 aaPredicted RBP9.48□□□□□ -0.89
TRIM6-212ENST00000621176 PCDHA3Q9Y5H8 950 aa9.48□□□□□ -0.89
TRIM6-212ENST00000621176 TCRBV7S2A1N4TA0A589 114 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 CCDC169A6NNP5 214 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 SLITRK3O94933 977 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 FAM13AO94988 1023 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 IFNAR2P48551 515 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 HIBCHQ6NVY1 386 aaPredicted RBP9.47□□□□□ -0.89
TRIM6-212ENST00000621176 C1orf186Q6ZWK4 172 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 TPH2Q8IWU9 490 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 HSD17B14Q9BPX1 270 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 ELAC2Q9BQ52 826 aaKnown RBP9.47□□□□□ -0.89
TRIM6-212ENST00000621176 POLR3CQ9BUI4 534 aaPredicted RBP9.47□□□□□ -0.89
TRIM6-212ENST00000621176 INTS9Q9NV88 658 aaKnown RBP9.47□□□□□ -0.89
TRIM6-212ENST00000621176 ODF2LQ9ULJ1 636 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 TRPC6Q9Y210 931 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 ANKRD63C9JTQ0 380 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 EIF3DO15371 548 aaKnown RBP eCLIP9.47□□□□□ -0.89
TRIM6-212ENST00000621176 ASAP2O43150 1006 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 PPP1R12BO60237 982 aaPredicted RBP9.47□□□□□ -0.89
TRIM6-212ENST00000621176 CACNB3P54284 484 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 PPP1R7Q15435 360 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 PPP2R5EQ16537 467 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 CCDC38Q502W7 563 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 FAM196AQ6ZSG2 479 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 CPNE8Q86YQ8 564 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 GIMAP7Q8NHV1 300 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 LMO3Q8TAP4 145 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 AMNQ9BXJ7 453 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 DBR1Q9UK59 544 aaKnown RBP9.47□□□□□ -0.89
TRIM6-212ENST00000621176 C10orf71Q711Q0 1435 aa9.47□□□□□ -0.89
TRIM6-212ENST00000621176 SMCHD1A6NHR9 2005 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 TMEM110-MUSTN1A8MSY1 372 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 CHMP2AO43633 222 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 C21orf2O43822 256 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 PHF2O75151 1096 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 FTLP02792 175 aaPredicted RBP9.46□□□□□ -0.89
TRIM6-212ENST00000621176 GAP43P17677 238 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 ELF1P32519 619 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 TCP10Q12799 353 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 MKRN4PQ13434 485 aaPredicted RBP9.46□□□□□ -0.89
TRIM6-212ENST00000621176 KIF22Q14807 665 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 SLC15A2Q16348 729 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.89
TRIM6-212ENST00000621176 ZNF720Q7Z2F6 126 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 RPAINQ86UA6 219 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 ANKS4BQ8N8V4 417 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 MAGEC3Q8TD91 643 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 HOOK2Q96ED9 719 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 MKNK1Q9BUB5 465 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 AGPAT3Q9NRZ7 376 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 DMAC2Q9NW81 257 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 CTTNBP2NLQ9P2B4 639 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 SLC12A4Q9UP95 1085 aa9.46□□□□□ -0.89
TRIM6-212ENST00000621176 GREB1LQ9C091 1923 aaPredicted RBP9.46□□□□□ -0.89
TRIM6-212ENST00000621176 HLA-DOAP06340 250 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 VIMP08670 466 aaKnown RBP9.46□□□□□ -0.9
TRIM6-212ENST00000621176 CIITAP33076 1130 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 PEX5P50542 639 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 DLG4P78352 724 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 AHDC1Q5TGY3 1603 aaPredicted RBP9.46□□□□□ -0.9
TRIM6-212ENST00000621176 MSL1Q68DK7 614 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 ZNF746Q6NUN9 644 aaPredicted RBP9.46□□□□□ -0.9
TRIM6-212ENST00000621176 CCDC137Q6PK04 289 aaKnown RBP9.46□□□□□ -0.9
TRIM6-212ENST00000621176 FBXO11Q86XK2 927 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 CCDC50Q8IVM0 306 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 BANK1Q8NDB2 785 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 N4BP2L2Q92802 583 aaPredicted RBP9.46□□□□□ -0.9
TRIM6-212ENST00000621176 MKL1Q969V6 931 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 RBM17Q96I25 401 aaKnown RBP9.46□□□□□ -0.9
TRIM6-212ENST00000621176 DYDC2Q96IM9 177 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 AGPAT1Q99943 283 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 PARVGQ9HBI0 331 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 WRAP73Q9P2S5 460 aaPredicted RBP9.46□□□□□ -0.9
TRIM6-212ENST00000621176 PCYOX1Q9UHG3 505 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 GGT7Q9UJ14 662 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 PTPN22Q9Y2R2 807 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 PCDHAC2Q9Y5I4 1007 aa9.46□□□□□ -0.9
TRIM6-212ENST00000621176 EP400Q96L91 3159 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 IGLV3-22A0A075B6J6 115 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 F5H6K3 240 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 RIPK2O43353 540 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 BBOX1O75936 387 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 ATP6V1G2O95670 118 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 AGTP01019 485 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 PYGMP11217 842 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 CTNNA2P26232 953 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 CHRNA3P32297 505 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 ZNF76P36508 570 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 KCNJ1P48048 391 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 MYL7Q01449 175 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 AUHQ13825 339 aaKnown RBP9.45□□□□□ -0.9
TRIM6-212ENST00000621176 NFIL3Q16649 462 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 FAM133BQ5BKY9 247 aaKnown RBP9.45□□□□□ -0.9
TRIM6-212ENST00000621176 TNFAIP8L3Q5GJ75 292 aa9.45□□□□□ -0.9
TRIM6-212ENST00000621176 C6orf118Q5T5N4 469 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms