RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 POU5F1BQ06416 359 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 TFDP1Q14186 410 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 E2F4Q16254 413 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 RRAGBQ5VZM2 374 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 RESP18Q5W5W9 173 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 GPBP1Q86WP2 473 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 RASSF8Q8NHQ8 419 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 TIFAQ96CG3 184 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 SPATA32Q96LK8 384 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 NFKBIZQ9BYH8 718 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 CCDC113Q9H0I3 377 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 STK17AQ9UEE5 414 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 CCDC39Q9UFE4 941 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 USP20Q9Y2K6 914 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 RBM19Q9Y4C8 960 aaKnown RBP11.95□□□□□ -0.5
TARDBP-223ENST00000620632 PCDHA11Q9Y5I1 949 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 TRIP11Q15643 1979 aa11.95□□□□□ -0.5
TARDBP-223ENST00000620632 REV3LO60673 3130 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 DENND3A2RUS2 1198 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 MYMKA6NI61 221 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 INO80B-WBP1J3KQ70 363 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 B4GALT5O43286 388 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 TLL1O43897 1013 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 IBSPP21815 317 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-223ENST00000620632 SFPQP23246 707 aaKnown RBP eCLIP11.94□□□□□ -0.5
TARDBP-223ENST00000620632 TXLNAP40222 546 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 NAMPTP43490 491 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 NPTX2P47972 431 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 SARSP49591 514 aaKnown RBP11.94□□□□□ -0.5
TARDBP-223ENST00000620632 PEX3P56589 373 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 FAM189BP81408 668 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 GIT2Q14161 759 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 ODR4Q5SWX8 454 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 UBXN11Q5T124 520 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 SLC24A5Q71RS6 500 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 TAS1R3Q7RTX0 852 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 KIFAP3Q92845 792 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 CPB2Q96IY4 423 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 INO80BQ9C086 356 aaPredicted RBP11.94□□□□□ -0.5
TARDBP-223ENST00000620632 RNF19AQ9NV58 838 aa11.94□□□□□ -0.5
TARDBP-223ENST00000620632 PIN4Q9Y237 131 aaKnown RBP11.94□□□□□ -0.5
TARDBP-223ENST00000620632 MEIS3P2A8K0S8 358 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 DGKIO75912 1065 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 LINC00271P0C7V0 271 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 ARF4P18085 180 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-223ENST00000620632 STAT6P42226 847 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 TAP1Q03518 808 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 RAB30Q15771 203 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 CCDC73Q6ZRK6 1079 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 ZNF598Q86UK7 904 aaKnown RBP11.93□□□□□ -0.5
TARDBP-223ENST00000620632 CDR2LQ86X02 465 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-223ENST00000620632 ECHDC2Q86YB7 292 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 NPAS4Q8IUM7 802 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-223ENST00000620632 STAMQ92783 540 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 DHX58Q96C10 678 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 ZNF689Q96CS4 500 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-223ENST00000620632 DRC1Q96MC2 740 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 FAM161BQ96MY7 647 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 FIZ1Q96SL8 496 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 RAD9AQ99638 391 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 ZBED2Q9BTP6 218 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 FZD8Q9H461 694 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 C1orf112Q9NSG2 853 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 KCND2Q9NZV8 630 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 ARHGAP28Q9P2N2 729 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 MSRAQ9UJ68 235 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
TARDBP-223ENST00000620632 ATP6V1DQ9Y5K8 247 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 TDRD15B5MCY1 1934 aaKnown RBP11.93□□□□□ -0.5
TARDBP-223ENST00000620632 PLXNA4Q9HCM2 1894 aa11.93□□□□□ -0.5
TARDBP-223ENST00000620632 COL6A3P12111 3177 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 TRANK1O15050 2925 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 A0A0U1RQF3 1178 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 A0A1B0GVL5 298 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 EPOPA6NHQ4 379 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 SLC16A4O15374 487 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 POLR2DO15514 142 aaKnown RBP11.92□□□□□ -0.5
TARDBP-223ENST00000620632 ERLIN2O94905 339 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 FGFR1P11362 822 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 PLS3P13797 630 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 ZSCAN20P17040 1043 aaPredicted RBP11.92□□□□□ -0.5
TARDBP-223ENST00000620632 ZNF131P52739 623 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 PPP2R5AQ15172 486 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 FAM187BQ17R55 369 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 ADALQ6DHV7 355 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 TWF2Q6IBS0 349 aaKnown RBP11.92□□□□□ -0.5
TARDBP-223ENST00000620632 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 PPP4R3CPQ6ZMV5 832 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 DYMQ7RTS9 669 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 DEPTORQ8TB45 409 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 LPPQ93052 612 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 DNAJC19Q96DA6 116 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 IFT74Q96LB3 600 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 TIPINQ9BVW5 301 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 TRAIPQ9BWF2 469 aa11.92□□□□□ -0.5
TARDBP-223ENST00000620632 EIF2AQ9BY44 585 aaKnown RBP11.92□□□□□ -0.5
TARDBP-223ENST00000620632 SCAND2PQ9GZW5 306 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms