RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 GALNT8Q9NY28 637 aa10.5□□□□□ -0.73
TNFAIP3-210ENST00000620204 HDAC9Q9UKV0 1011 aa10.5□□□□□ -0.73
TNFAIP3-210ENST00000620204 CHMP2BQ9UQN3 213 aa10.5□□□□□ -0.73
TNFAIP3-210ENST00000620204 SCN11AQ9UI33 1791 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 A0A0G2JND7 137 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 NOL4O94818 638 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 IL9RQ01113 521 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 ERFEQ4G0M1 354 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 SEL1L2Q5TEA6 688 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 ADGRA1Q86SQ6 560 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 COL23A1Q86Y22 540 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 MYLK4Q86YV6 388 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 SH3RF3Q8TEJ3 882 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 POP1Q99575 1024 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 NMRK1Q9NWW6 199 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 NHSL1Q5SYE7 1610 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 LIN7AO14910 233 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 UCHL3P15374 230 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 YY1P25490 414 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 ATP5DP30049 168 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 CDR2Q01850 454 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 SLC5A9Q2M3M2 681 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 KRT27Q7Z3Y8 459 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 NEK8Q86SG6 692 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 C9orf72Q96LT7 481 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 TFCP2L1Q9NZI6 479 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 MAP3K7O43318 606 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 XRCC5P13010 732 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 CPA2P48052 419 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 TRAPPC3LQ5T215 181 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 ZNF444Q8N0Y2 327 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 C4orf32Q8N8J7 132 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 CFAP61Q8NHU2 1237 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 RPGRQ92834 1020 aaKnown RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 OPTNQ96CV9 577 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 PWWP2AQ96N64 755 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 DENND2DQ9H6A0 471 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 BSDC1Q9NW68 430 aaPredicted RBP10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 TMEM260Q9NX78 707 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 SPATA31A6Q5VVP1 1343 aa10.49□□□□□ -0.73
TNFAIP3-210ENST00000620204 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 PEX11AO75192 247 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 DDAH1O94760 285 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 APBA3O96018 575 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 CCDC152Q4G0S7 254 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 EPM2AIP1Q7L775 607 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 CROCCP2Q86T23 111 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 C1orf54Q8WWF1 131 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 NMD3Q96D46 503 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 HIC2Q96JB3 615 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 FAM118BQ9BPY3 351 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 CCDC77Q9BR77 488 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 PREBQ9HCU5 417 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 C6orf50Q9HD87 102 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 UBN1Q9NPG3 1134 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 ZFP69BQ9UJL9 534 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 MTUS1Q9ULD2 1270 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 GYG2O15488 501 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 RIPK2O43353 540 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 KRT36O76013 467 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 TSPY3P0CV98 308 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 TSPY8P0CW00 308 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 ADCY8P40145 1251 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 CCNFP41002 786 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 MCL1Q07820 350 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 OVGP1Q12889 678 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 STRN3Q13033 797 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 MAPK7Q13164 816 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 ACBD5Q5T8D3 534 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 ZNF746Q6NUN9 644 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 TRMT1LQ7Z2T5 733 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 C4orf33Q8N1A6 199 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 AGGF1Q8N302 714 aaeCLIP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 FBXO41Q8TF61 875 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 SUDS3Q9H7L9 328 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 TMEM59LQ9UK28 342 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 SLC4A7Q9Y6M7 1214 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 ATP6V1G1O75348 118 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 HNRNPCP07910 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 VHLP40337 213 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 KHDC1Q4VXA5 237 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 ZC2HC1CQ53FD0 456 aaPredicted RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 TBC1D9BQ66K14 1250 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 MTHFD1LQ6UB35 978 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 NT5DC3Q86UY8 548 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 CDC42EP4Q9H3Q1 356 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 NPHS2Q9NP85 383 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 GCNT4Q9P109 453 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 C5P01031 1676 aa10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 PARP4Q9UKK3 1724 aaKnown RBP10.48□□□□□ -0.73
TNFAIP3-210ENST00000620204 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 MYBP10242 640 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 CA4P22748 312 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 COASYQ13057 564 aa10.47□□□□□ -0.73
TNFAIP3-210ENST00000620204 LRRC55Q6ZSA7 311 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms