RNA–Protein interactions for RNA: ENST00000619920.4

PSMC3-213, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-213ENST00000619920 MAPK8IP2Q13387 824 aaPredicted RBP16.72■□□□□ 0.27
PSMC3-213ENST00000619920 MSL3Q8N5Y2 521 aaKnown RBP16.72■□□□□ 0.27
PSMC3-213ENST00000619920 EMID1Q96A84 441 aaPredicted RBP16.72■□□□□ 0.27
PSMC3-213ENST00000619920 TMEM143Q96AN5 459 aa16.72■□□□□ 0.27
PSMC3-213ENST00000619920 PCIF1Q9H4Z3 704 aa16.72■□□□□ 0.27
PSMC3-213ENST00000619920 NLRC4Q9NPP4 1024 aa16.72■□□□□ 0.27
PSMC3-213ENST00000619920 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.72■□□□□ 0.27
PSMC3-213ENST00000619920 SLC5A4Q9NY91 659 aa16.72■□□□□ 0.27
PSMC3-213ENST00000619920 AIPL1Q9NZN9 384 aa16.72■□□□□ 0.27
PSMC3-213ENST00000619920 DNAI1Q9UI46 699 aa16.72■□□□□ 0.27
PSMC3-213ENST00000619920 ADGRA2Q96PE1 1338 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 TISP43B9A030 160 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 ANKRD63C9JTQ0 380 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 RIOK3O14730 519 aaKnown RBP16.71■□□□□ 0.27
PSMC3-213ENST00000619920 P4HA2O15460 535 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 N4BP1O75113 896 aaKnown RBP16.71■□□□□ 0.27
PSMC3-213ENST00000619920 GH1P01241 217 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 UCHL3P15374 230 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 GARTP22102 1010 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 GLRA2P23416 452 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 ADSSP30520 456 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 GTF2F1P35269 517 aaKnown RBP eCLIP16.71■□□□□ 0.27
PSMC3-213ENST00000619920 VAMP7P51809 220 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 GNG11P61952 73 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 ARHGAP1Q07960 439 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 PLCB4Q15147 1175 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 IER5Q5VY09 327 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 RGMBQ6NW40 437 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 COPS5Q92905 334 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.27
PSMC3-213ENST00000619920 KATNBL1Q9H079 304 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 GCNT4Q9P109 453 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 ARHGAP20Q9P2F6 1191 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 REXO2Q9Y3B8 237 aaKnown RBP16.71■□□□□ 0.27
PSMC3-213ENST00000619920 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
PSMC3-213ENST00000619920 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
PSMC3-213ENST00000619920 PMM2O15305 246 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 KIF5CO60282 957 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 LCA5LO95447 670 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 SNAI1O95863 264 aaPredicted RBP16.7■□□□□ 0.26
PSMC3-213ENST00000619920 SERPING1P05155 500 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 ARHGAP25P42331 645 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 INHBEP58166 350 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 HSP90AA2PQ14568 343 aaPredicted RBP16.7■□□□□ 0.26
PSMC3-213ENST00000619920 SLC9C1Q4G0N8 1177 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 SAPCD2Q86UD0 394 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 DEPTORQ8TB45 409 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 ASAP3Q8TDY4 903 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 TCP11Q8WWU5 503 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 MAML3Q96JK9 1138 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 FBXL18Q96ME1 805 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 HAUS4Q9H6D7 363 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 TMEM134Q9H6X4 195 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 SIX2Q9NPC8 291 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 LZTFL1Q9NQ48 299 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 MYO1AQ9UBC5 1043 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 MCM3APO60318 1980 aa16.7■□□□□ 0.26
PSMC3-213ENST00000619920 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 IGKV6-21A0A0C4DH24 114 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 HBP1O60381 514 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 PIGRP01833 764 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 UQCRHP07919 91 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 ACTN1P12814 892 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 EIF4A3P38919 411 aaKnown RBP16.69■□□□□ 0.26
PSMC3-213ENST00000619920 CETN1Q12798 172 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 STRN3Q13033 797 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 SPA17Q15506 151 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 HGSNATQ68CP4 663 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 SLC39A4Q6P5W5 647 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
PSMC3-213ENST00000619920 ZBTB42B2RXF5 422 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
PSMC3-213ENST00000619920 HNRNPDLO14979 420 aaKnown RBP16.68■□□□□ 0.26
PSMC3-213ENST00000619920 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 CASQ1P31415 396 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 MYL7Q01449 175 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 IRF5Q13568 498 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 SNRNP35Q16560 246 aaKnown RBP16.68■□□□□ 0.26
PSMC3-213ENST00000619920 ASTE1Q2TB18 679 aaPredicted RBP16.68■□□□□ 0.26
PSMC3-213ENST00000619920 USP37Q86T82 979 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 PPTC7Q8NI37 304 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 TMC2Q8TDI7 906 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 BICD1Q96G01 975 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 SPAG5Q96R06 1193 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 TINF2Q9BSI4 451 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 ABHD16BQ9H3Z7 469 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 DEF6Q9H4E7 631 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 L2HGDHQ9H9P8 463 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 KIAA1586Q9HCI6 787 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 ERAP1Q9NZ08 941 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 BZW2Q9Y6E2 419 aaKnown RBP16.68■□□□□ 0.26
PSMC3-213ENST00000619920 STYXL1Q9Y6J8 313 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 ZNF236Q9UL36 1845 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 PASKQ96RG2 1323 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 LRRIQ4A6NIV6 560 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 K7ERI5 159 aa16.68■□□□□ 0.26
PSMC3-213ENST00000619920 AKR1B10O60218 316 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms