RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 GABRQQ9UN88 632 aa8.89□□□□□ -0.99
CBWD1-228ENST00000619157 IGKV6D-41A0A0C4DH26 115 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 SHISA3A0PJX4 238 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 MINDY4BA8MYZ0 360 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 PATL2C9JE40 543 aaKnown RBP8.88□□□□□ -0.99
CBWD1-228ENST00000619157 MPHOSPH10O00566 681 aaKnown RBP8.88□□□□□ -0.99
CBWD1-228ENST00000619157 PRDM1O75626 825 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 EFEMP2O95967 443 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 P4HBP07237 508 aaKnown RBP8.88□□□□□ -0.99
CBWD1-228ENST00000619157 TFE3P19532 575 aaPredicted RBP8.88□□□□□ -0.99
CBWD1-228ENST00000619157 RGS19P49795 217 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 KRTAP10-2P60368 255 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 HERVK_113P62684 666 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 TEKQ02763 1124 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 PRKCZQ05513 592 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 FAM110CQ1W6H9 321 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 TMEM179Q6ZVK1 233 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 SPPL2CQ8IUH8 684 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 ANKRD13CQ8N6S4 541 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 FAM13CQ8NE31 585 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 ARMC5Q96C12 935 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 RTEL1Q9NZ71 1219 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 MORF4L1Q9UBU8 362 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 SRRDQ9UH36 339 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.88□□□□□ -0.99
CBWD1-228ENST00000619157 TMX2Q9Y320 296 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 RLFQ13129 1914 aa8.88□□□□□ -0.99
CBWD1-228ENST00000619157 GNAT2P19087 354 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 SDSP20132 328 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 TDO2P48775 406 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 CHRNEQ04844 493 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 ICA1Q05084 483 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 CATSPERGQ6ZRH7 1159 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 SMCR8Q8TEV9 937 aaPredicted RBP8.87□□□□□ -0.99
CBWD1-228ENST00000619157 SH3TC2Q8TF17 1288 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 ZNF333Q96JL9 665 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 ASB16Q96NS5 453 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 PORCNQ9H237 461 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 CABP5Q9NP86 173 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 HELLSQ9NRZ9 838 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 TMOD4Q9NZQ9 345 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 ADAM30Q9UKF2 790 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 PLXNB2O15031 1838 aa8.87□□□□□ -0.99
CBWD1-228ENST00000619157 A0A0G2JMZ2 1700 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 MGAMO43451 1857 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 OTOL1A6NHN0 477 aaPredicted RBP8.86□□□□□ -0.99
CBWD1-228ENST00000619157 APPP05067 770 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 EEF2P13639 858 aaKnown RBP8.86□□□□□ -0.99
CBWD1-228ENST00000619157 EIF4BP23588 611 aaKnown RBP8.86□□□□□ -0.99
CBWD1-228ENST00000619157 EPHB3P54753 998 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 PPARAQ07869 468 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 DUSP4Q13115 394 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 SKOR2Q2VWA4 1001 aaPredicted RBP8.86□□□□□ -0.99
CBWD1-228ENST00000619157 TMEM151BQ8IW70 566 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 ANKS4BQ8N8V4 417 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 RNF141Q8WVD5 230 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 RILPL2Q969X0 211 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 CCDC17Q96LX7 622 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 FEZ1Q99689 392 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 XYLT2Q9H1B5 865 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 RPAP3Q9H6T3 665 aaPredicted RBP8.86□□□□□ -0.99
CBWD1-228ENST00000619157 BTBD7Q9P203 1132 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 GJD2Q9UKL4 321 aa8.86□□□□□ -0.99
CBWD1-228ENST00000619157 CCDC171Q6TFL3 1326 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 MYPNQ86TC9 1320 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 OR14I1A6ND48 311 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 FGAP02671 866 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 FGRP09769 529 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 HSPD1P10809 573 aaKnown RBP8.85□□□□□ -0.99
CBWD1-228ENST00000619157 GCLCP48506 637 aaPredicted RBP8.85□□□□□ -0.99
CBWD1-228ENST00000619157 FLT3LGP49771 235 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 USP14P54578 494 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 IRX3P78415 501 aaPredicted RBP8.85□□□□□ -0.99
CBWD1-228ENST00000619157 SRSF3P84103 164 aaKnown RBP8.85□□□□□ -0.99
CBWD1-228ENST00000619157 RPL6Q02878 288 aaKnown RBP8.85□□□□□ -0.99
CBWD1-228ENST00000619157 PABPC4Q13310 644 aaKnown RBP eCLIP8.85□□□□□ -0.99
CBWD1-228ENST00000619157 ALX1Q15699 326 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 VMACQ2NL98 169 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 TSNAXIP1Q2TAA8 658 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 LRRFIP1Q32MZ4 808 aaKnown RBP8.85□□□□□ -0.99
CBWD1-228ENST00000619157 MCMDC2Q4G0Z9 681 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 FAM47AQ5JRC9 791 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 TTC22Q5TAA0 569 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 LBX2Q6XYB7 198 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 RASGRP2Q7LDG7 609 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 SPICE1Q8N0Z3 855 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 FEZF2Q8TBJ5 459 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 CEP95Q96GE4 821 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 NAPBQ9H115 298 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 VCPKMTQ9H867 229 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 MBD1Q9UIS9 605 aaPredicted RBP8.85□□□□□ -0.99
CBWD1-228ENST00000619157 ANAPC4Q9UJX5 808 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 TLR6Q9Y2C9 796 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 IRAK3Q9Y616 596 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 MYH8P13535 1937 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 PLIN4Q96Q06 1357 aa8.85□□□□□ -0.99
CBWD1-228ENST00000619157 NOTOA8MTQ0 251 aa8.84□□□□□ -0.99
CBWD1-228ENST00000619157 PLCG1P19174 1290 aa8.84□□□□□ -0.99
CBWD1-228ENST00000619157 SDHBP21912 280 aa8.84□□□□□ -0.99
CBWD1-228ENST00000619157 KIF22Q14807 665 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms