RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 TMEM120BA0PK00 339 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 WDR91A4D1P6 747 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CCDC160A6NGH7 325 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ATMINO43313 823 aaPredicted RBP14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 YY1P25490 414 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CALCOCO2Q13137 446 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CYP4F22Q6NT55 531 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 NSMFQ6X4W1 530 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CCDC125Q86Z20 511 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ZNF483Q8TF39 744 aaPredicted RBP14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PNMA5Q96PV4 448 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 BARHL2Q9NY43 387 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PCDHA12Q9UN75 941 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 YDJCA8MPS7 323 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SPOPO43791 374 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SPAG7O75391 227 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DNAJC8O75937 253 aaPredicted RBP14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 GCNT3O95395 438 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 MYL1P05976 194 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TARSP26639 723 aaKnown RBP14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PPP1R2P41236 205 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 MUM1Q2TAK8 710 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RCSD1Q6JBY9 416 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SLC30A10Q6XR72 485 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RNF25Q96BH1 459 aaPredicted RBP14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PCDHGC5Q9Y5F6 944 aa14.77□□□□□ -0.05
CNTNAP3B-215ENST00000619138 GH1P01241 217 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RASA1P20936 1047 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 HNRNPH3P31942 346 aaKnown RBP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 MSH2P43246 934 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PDE6CP51160 858 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CYP2J2P51589 502 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PSMD2Q13200 908 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ASTE1Q2TB18 679 aaPredicted RBP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SLC35G2Q8TBE7 412 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RAD54LQ92698 747 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PRMT6Q96LA8 375 aaPredicted RBP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 AK8Q96MA6 479 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PWWP2AQ96N64 755 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 IL17RBQ9NRM6 502 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 METTL5Q9NRN9 209 aaKnown RBP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USH1CQ9Y6N9 552 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 GDF11O95390 407 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 GNAT1P11488 350 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 STAT1P42224 750 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 RCAN1P53805 252 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 MTM1Q13496 603 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SEPT7Q16181 437 aaKnown RBP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 APOBEC3HQ6NTF7 200 aaKnown RBP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 JAMLQ86YT9 394 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 NUCKS1Q9H1E3 243 aaKnown RBP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CUEDC2Q9H467 287 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 BCAS3Q9H6U6 928 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 HOMER3Q9NSC5 361 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP15Q9Y4E8 981 aaPredicted RBP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SLX4Q8IY92 1834 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CCDC188H7C350 402 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CASP4P49662 377 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 NCALDP61601 193 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ARHGAP27Q6ZUM4 889 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CEP95Q96GE4 821 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ARAP2Q8WZ64 1704 aa14.76□□□□□ -0.05
CNTNAP3B-215ENST00000619138 hCG_2014768A0A024R1R8 64 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 LRRD1A4D1F6 860 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 POTEFA5A3E0 1075 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 AKR1B1P15121 316 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 POTEGQ6S5H5 508 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 POTEEQ6S8J3 1075 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TAOK1Q7L7X3 1001 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DTX3LQ8TDB6 740 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ATXN2Q99700 1313 aaKnown RBP14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ECM1Q16610 540 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 KIAA1755Q5JYT7 1200 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SCFD2Q8WU76 684 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ELMO3Q96BJ8 720 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TGS1Q96RS0 853 aaKnown RBP14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SH3GL3Q99963 347 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TRIM7Q9C029 511 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 NKIRAS1Q9NYS0 192 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 MAD2L2Q9UI95 211 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 HAO1Q9UJM8 370 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CASZ1Q86V15 1759 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 CHMP2AO43633 222 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 PCP11498 1178 aaKnown RBP14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 BRAFP15056 766 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ZNF572Q7Z3I7 529 aaPredicted RBP14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 LMNTD2Q8IXW0 634 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 C1orf54Q8WWF1 131 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 IQCDQ96DY2 449 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 BTBD6Q96KE9 485 aa14.75□□□□□ -0.05
CNTNAP3B-215ENST00000619138 USP17L5A8MUK1 530 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 MARCKSL1P49006 195 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 COPS2P61201 443 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 SLC35G1Q2M3R5 365 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 TLDC1Q6P9B6 456 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 C7orf43Q8WVR3 580 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 ERP44Q9BS26 406 aa14.74□□□□□ -0.05
CNTNAP3B-215ENST00000619138 DLGAP2Q9P1A6 1054 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms