RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 A0A0G2JPF8 293 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 OR6C65A6NJZ3 312 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 PHF20L1A8MW92 1017 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HNRNPCL3B7ZW38 293 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 DDX3YO15523 660 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CTIFO43310 598 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 TRIM16O95361 564 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HNRNPCL4P0DMR1 293 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HSD3B1P14060 373 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 GBP2P32456 591 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 GCLCP48506 637 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HNRNPMP52272 730 aaKnown RBP eCLIP4.44□□□□□ -1.74e-13■■■■■ 32.7
UBE2D3-233ENST00000618836 RARSP54136 660 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 DDR1Q08345 913 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 APOBRQ0VD83 1088 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 FRG1Q14331 258 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 GEN1Q17RS7 908 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 ATP13A4Q4VNC1 1196 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HID1Q8IV36 788 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 TXLNBQ8N3L3 684 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC4A11Q8NBS3 891 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC17A8Q8NDX2 589 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 OR52K1Q8NGK4 314 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 GOT1L1Q8NHS2 421 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CDCA5Q96FF9 252 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CATSPER2Q96P56 530 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RUFY1Q96T51 708 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 SETDB2Q96T68 719 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 C2orf40Q9H1Z8 148 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 LEMD3Q9Y2U8 911 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 SPATA31A1Q5TZJ5 1347 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 NPC1L1Q9UHC9 1359 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 A0A087X0B3 334 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CCDC69A6NI79 296 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 UBXN8O00124 270 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 STRNO43815 780 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 TLR5O60602 858 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 FRAT2O75474 233 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 NPPAP01160 153 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 VIMP08670 466 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RLBP1P12271 317 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 HPGDP15428 266 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 TMEM11P17152 192 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RFC4P35249 363 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 ABCG1P45844 678 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 GBX1Q14549 363 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CFAP221Q4G0U5 840 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RNASEH2BQ5TBB1 312 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 C15orf52Q6ZUT6 534 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RNF180Q86T96 592 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RNF10Q8N5U6 811 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 EMID1Q96A84 441 aaPredicted RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 CARD14Q9BXL6 1004 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 PRKD2Q9BZL6 878 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 VPS11Q9H270 941 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 XAB2Q9HCS7 855 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 SDHAF3Q9NRP4 125 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 PLSCR4Q9NRQ2 329 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 MTRF1LQ9UGC7 380 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 TEKT2Q9UIF3 430 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RRP7AQ9Y3A4 280 aaKnown RBP4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 RIMS2Q9UQ26 1411 aa4.44□□□□□ -1.7
UBE2D3-233ENST00000618836 KMT2BQ9UMN6 2715 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L15C9J2P7 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L10C9JJH3 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L13C9JLJ4 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L12C9JPN9 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L11C9JVI0 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L21D6R901 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L18D6R9N7 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L22D6RA61 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L17D6RBQ6 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L19D6RCP7 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L20D6RJB6 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 TLR3O15455 904 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 TSPAN3O60637 253 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 ALDH1A2O94788 518 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 ZFYP08048 801 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 CTSHP09668 335 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 C6orf222P0C671 652 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 THEGLP0DJG4 465 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 DLATP10515 647 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 ANXA13P27216 316 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 POLR2BP30876 1174 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 SOX11P35716 441 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 RANBP1P43487 201 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 ARHGDIBP52566 201 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 HADHBP55084 474 aaKnown RBP4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 COPS2P61201 443 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L24Q0WX57 530 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 BECN1Q14457 450 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 MAPRE2Q15555 327 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 DIXDC1Q155Q3 683 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC45A4Q5BKX6 768 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 PM20D1Q6GTS8 502 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 C10orf67Q8IYJ2 551 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 SIX5Q8N196 739 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 AFAP1L2Q8N4X5 818 aa4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM160A2Q8N612 972 aaPredicted RBP4.43□□□□□ -1.7
UBE2D3-233ENST00000618836 SYT2Q8N9I0 419 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms