RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 OTOP1Q7RTM1 612 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 NT5DC3Q86UY8 548 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 CPNE8Q86YQ8 564 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 GLYCTKQ8IVS8 523 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 CD302Q8IX05 232 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 IFT20Q8IY31 132 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ZDHHC14Q8IZN3 488 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 RASGEF1CQ8N431 466 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 LMO3Q8TAP4 145 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ACTRT1Q8TDG2 376 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ATP8B4Q8TF62 1192 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ZC3H15Q8WU90 426 aaKnown RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 PRMT6Q96LA8 375 aaPredicted RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 NAP1L4Q99733 375 aaKnown RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 POLR3CQ9BUI4 534 aaPredicted RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 GLIS2Q9BZE0 524 aaPredicted RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ERVK-5Q9HDB9 667 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 CWC15Q9P013 229 aaKnown RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 PI4KBQ9UBF8 816 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 RNF14Q9UBS8 474 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 FBXL5Q9UKA1 691 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 PPP1R9AQ9ULJ8 1098 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 DNM3Q9UQ16 869 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 PLAAQ9Y263 795 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 RABGAP1Q9Y3P9 1069 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SAMM50Q9Y512 469 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SPATA31A6Q5VVP1 1343 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SPDYE3A6NKU9 549 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 MYO1FO00160 1098 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 PIK3CDO00329 1044 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 CES2O00748 559 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SART1O43290 800 aaKnown RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 CEP104O60308 925 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 BUB1BO60566 1050 aaPredicted RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 MMP10P09238 476 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 VSIG8P0DPA2 414 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ARP10275 920 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 BMP3P12645 472 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 OSBPP22059 807 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 HSD17B3P37058 310 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 NOP2P46087 812 aaKnown RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 MARCKSL1P49006 195 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 FMO5P49326 533 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ZNF131P52739 623 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SEC24CP53992 1094 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 DLG4P78352 724 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ZNF844Q08AG5 666 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SPP2Q13103 211 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ITGB3BPQ13352 177 aaPredicted RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 RPS6KA1Q15418 735 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SLC15A2Q16348 729 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 AOC3Q16853 763 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SPRED3Q2MJR0 410 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 C1orf220Q5T0J3 134 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 EMC10Q5UCC4 262 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 STRIP1Q5VSL9 837 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 CCDC70Q6NSX1 233 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 KDM7AQ6ZMT4 941 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SCUBE3Q8IX30 993 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 IL31RAQ8NI17 732 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 PLEKHO2Q8TD55 490 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 BCAS4Q8TDM0 211 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 U2AF1L4Q8WU68 220 aaKnown RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SLC20A1Q8WUM9 679 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ALG3Q92685 438 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SLC5A5Q92911 643 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 HES6Q96HZ4 224 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 FAM20AQ96MK3 541 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 SPAG5Q96R06 1193 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 TRIM51Q9BSJ1 452 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 STRA6Q9BX79 667 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 ISCUQ9H1K1 167 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 EPB41L4BQ9H329 900 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 UNC45AQ9H3U1 944 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 TAF1DQ9H5J8 278 aaPredicted RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 AGPAT3Q9NRZ7 376 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 DMAC2Q9NW81 257 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 COL20A1Q9P218 1284 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 CNOT8Q9UFF9 292 aaKnown RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 CHORDC1Q9UHD1 332 aaPredicted RBP4.7□□□□□ -1.66
SEC22B-202ENST00000618538 AMACRQ9UHK6 382 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 NCANO14594 1321 aa4.7□□□□□ -1.66
SEC22B-202ENST00000618538 GTPBP10A4D1E9 387 aaKnown RBP4.69□□□□□ -1.66
SEC22B-202ENST00000618538 TMEM150BA6NC51 233 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 TMCO5BA8MYB1 307 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 TTI1O43156 1089 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 DAPK3O43293 454 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 CALUO43852 315 aaPredicted RBP4.69□□□□□ -1.66
SEC22B-202ENST00000618538 OPA1O60313 960 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 HSF2BPO75031 334 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 CHRNA5P30532 468 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 LSP1P33241 339 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 SOX5P35711 763 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 EPS15P42566 896 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 MAGEA9P43362 315 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 RBM5P52756 815 aaKnown RBP eCLIP4.69□□□□□ -1.66
SEC22B-202ENST00000618538 PPP2R5CQ13362 524 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 DRAP1Q14919 205 aaPredicted RBP4.69□□□□□ -1.66
SEC22B-202ENST00000618538 CFAP58Q5T655 872 aa4.69□□□□□ -1.66
SEC22B-202ENST00000618538 NAA35Q5VZE5 725 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms