RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 IQSEC3Q9UPP2 1182 aaPredicted RBP15.92■□□□□ 0.14
COL5A1-208ENST00000618395 DTNAQ9Y4J8 743 aa15.92■□□□□ 0.14
COL5A1-208ENST00000618395 IDH3BO43837 385 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 USP1O94782 785 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 EEF2KMTQ96G04 330 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 OSBPL8Q9BZF1 889 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 MED26O95402 600 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 OTUD4Q01804 1114 aaKnown RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 KCTD21Q4G0X4 260 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 SZRD1Q7Z422 152 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 CNDP1Q96KN2 507 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 SNX24Q9Y343 169 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 PCDHB4Q9Y5E5 795 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 POTEFA5A3E0 1075 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 MEIS1O00470 390 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 KYNUQ16719 465 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 TAF8Q7Z7C8 310 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 ZCCHC7Q8N3Z6 543 aaKnown RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 CCNYQ8ND76 341 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 C1orf50Q9BV19 199 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 MAN1B1Q9UKM7 699 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 CLIC4Q9Y696 253 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 PTGISQ16647 500 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 TRIQKQ629K1 86 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 B3GNT6Q6ZMB0 384 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 PIGOQ8TEQ8 1089 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 FAF2Q96CS3 445 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 THAP9Q9H5L6 903 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 ANTXR1Q9H6X2 564 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 BIRC5O15392 142 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 CDC40O60508 579 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 FKBP3Q00688 224 aaKnown RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 ICA1Q05084 483 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 LGALS3BPQ08380 585 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 DMP1Q13316 513 aaPredicted RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 TADA1Q96BN2 335 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 SNF8Q96H20 258 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 GCOM2Q9BZD3 368 aaPredicted RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 SLITRK6Q9H5Y7 841 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 MRPL39Q9NYK5 338 aaKnown RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 HESX1Q9UBX0 185 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 CC2D2AQ9P2K1 1620 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 CENPXA8MT69 81 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 PI4K2BG5E9Z4 385 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 SLFN12Q8IYM2 578 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 EIF3DO15371 548 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 ZBED1O96006 694 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 DLATP10515 647 aaKnown RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 ENO3P13929 434 aaPredicted RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 PRPF39Q86UA1 669 aaKnown RBP15.91■□□□□ 0.14
COL5A1-208ENST00000618395 P3H2Q8IVL5 708 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 TSPAN18Q96SJ8 248 aa15.91■□□□□ 0.14
COL5A1-208ENST00000618395 MIF4GDA9UHW6 222 aaKnown RBP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 TECP42680 631 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 SEMA3FQ13275 785 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 KRT27Q7Z3Y8 459 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 KIRREL3Q8IZU9 778 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 SCG3Q8WXD2 468 aaKnown RBP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 FAM227BQ96M60 508 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 TK2O00142 265 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 CENPPQ6IPU0 288 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 OSBPL5Q9H0X9 879 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 PCDHA12Q9UN75 941 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 UBN2Q6ZU65 1347 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 KIF14Q15058 1648 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 LINC00854A0A1B0GVQ3 168 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 SNX2O60749 519 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 SRGAP2CP0DJJ0 459 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 TALDO1P37837 337 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 TFCP2Q12800 502 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 SH2D3CQ8N5H7 860 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 ENKURQ8TC29 256 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 P2RX5Q93086 422 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 SUGT1Q9Y2Z0 365 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 COL4A3BPQ9Y5P4 624 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 ZMYM6O95789 1325 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 A0A1W2PRG6 482 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 NR2F2P24468 414 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 LLGL1Q15334 1064 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 CDC37Q16543 378 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 TPH2Q8IWU9 490 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 C20orf96Q9NUD7 363 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 TRADDQ15628 312 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 RUNDC3AQ59EK9 446 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 TRIM74Q86UV6 250 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 TRIM73Q86UV7 250 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 PIGUQ9H490 435 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 STON1Q9Y6Q2 735 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 FAM83GA6ND36 823 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 SEMA3EO15041 775 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 CHRNA3P32297 505 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 VSNL1P62760 191 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 PCNX4Q63HM2 1172 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 KSR2Q6VAB6 950 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 CCDC60Q8IWA6 550 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 ALKBH8Q96BT7 664 aaKnown RBP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 BPIFA3Q9BQP9 254 aa15.9■□□□□ 0.14
COL5A1-208ENST00000618395 MMADHCQ9H3L0 296 aaPredicted RBP15.9■□□□□ 0.14
COL5A1-208ENST00000618395 KRT84Q9NSB2 600 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms