RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TBXAS1P24557 533 aaPredicted RBP14.93□□□□□ -0.02
CIITA-213ENST00000618327 TCF7P36402 384 aaPredicted RBP14.93□□□□□ -0.02
CIITA-213ENST00000618327 VPS41P49754 854 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 OAZ1P54368 228 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 HERVK_113P62684 666 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 KSR1Q8IVT5 923 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 PBKQ96KB5 322 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 LRFN2Q9ULH4 789 aa14.93□□□□□ -0.02
CIITA-213ENST00000618327 RSPH10B2B2RC85 870 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 MAGEB2O15479 319 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 RSPH10BP0C881 870 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 GCLCP48506 637 aaPredicted RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 FUT2Q10981 343 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 MTF1Q14872 753 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 USP50Q70EL3 339 aaPredicted RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 TRIM50Q86XT4 487 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 MAP7D3Q8IWC1 876 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 RPUSD2Q8IZ73 545 aaKnown RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 MAGOHBQ96A72 148 aaKnown RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 HINFPQ9BQA5 517 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 KCNF1Q9H3M0 494 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 ERAP1Q9NZ08 941 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 ADCY8P40145 1251 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 GUCY2DQ02846 1103 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 PGM5Q15124 567 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 SNRNP35Q16560 246 aaKnown RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 DUOXA2Q1HG44 320 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 RUFY4Q6ZNE9 571 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 A6NNZ2 444 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 FMO5P49326 533 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 TUBB8Q3ZCM7 444 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 ERICH1Q86X53 443 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 OR6B3Q8NGW1 331 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 GPBP1L1Q9HC44 474 aaPredicted RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 AGO4Q9HCK5 861 aaKnown RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 CPSF2Q9P2I0 782 aaKnown RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 IGSF9BQ9UPX0 1349 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 ATP5DP30049 168 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 AP3M2P53677 418 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 CCZ1BP86790 482 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 CCZ1P86791 482 aaPredicted RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 LAMC2Q13753 1193 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 UAP1Q16222 522 aaPredicted RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 LMBRD2Q68DH5 695 aaPredicted RBP14.92□□□□□ -0.02
CIITA-213ENST00000618327 ENOSF1Q7L5Y1 443 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 MKNK1Q9BUB5 465 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 AGPAT5Q9NUQ2 364 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 ZNF148Q9UQR1 794 aa14.92□□□□□ -0.02
CIITA-213ENST00000618327 HBP1O60381 514 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 HPDP32754 393 aaPredicted RBP14.91□□□□□ -0.02
CIITA-213ENST00000618327 SOX5P35711 763 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 ACOT2P49753 483 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 GIT2Q14161 759 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 OR6B2Q6IFH4 312 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 CROCCP2Q86T23 111 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 CYP26B1Q9NR63 512 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 ADAM22Q9P0K1 906 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 SLC30A10Q6XR72 485 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 NUDT12Q9BQG2 462 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 C17orf75Q9HAS0 396 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 LRP6O75581 1613 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 ARFGEF2Q9Y6D5 1785 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 SYNJ2BP-COX16A0A087WUM0 186 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 ARHGEF37A1IGU5 675 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 PPATQ06203 517 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 VGLL4Q14135 290 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 TC2NQ8N9U0 490 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 TMEM35BQ8NCS4 154 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 DNERQ8NFT8 737 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 BEST2Q8NFU1 509 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 CDCA5Q96FF9 252 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 CHP1Q99653 195 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 SLC38A10Q9HBR0 1119 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 COX16Q9P0S2 106 aa14.91□□□□□ -0.02
CIITA-213ENST00000618327 KLRG2A4D1S0 409 aaPredicted RBP14.9□□□□□ -0.02
CIITA-213ENST00000618327 PALMO75781 387 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 C6orf222P0C671 652 aaPredicted RBP14.9□□□□□ -0.02
CIITA-213ENST00000618327 PPP1R21Q6ZMI0 780 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 TRPM4Q8TD43 1214 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 MRRFQ96E11 262 aaKnown RBP14.9□□□□□ -0.02
CIITA-213ENST00000618327 CNOT8Q9UFF9 292 aaKnown RBP14.9□□□□□ -0.02
CIITA-213ENST00000618327 A0A087X0B3 334 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 GOLGA6CA6NDK9 693 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 ABL1P00519 1130 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 GOLGA6DP0CG33 693 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 SNRPFP62306 86 aaKnown RBP14.9□□□□□ -0.02
CIITA-213ENST00000618327 IER5Q5VY09 327 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 DSTYKQ6XUX3 929 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 LRRC71Q8N4P6 559 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 P2RX7Q99572 595 aaKnown RBP14.9□□□□□ -0.02
CIITA-213ENST00000618327 GOLGA6AQ9NYA3 693 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 SCINQ9Y6U3 715 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 A6NJR5 290 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 ASAP2O43150 1006 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 VIMP08670 466 aaKnown RBP14.9□□□□□ -0.02
CIITA-213ENST00000618327 UCHL3P15374 230 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 GPC5P78333 572 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 LLGL1Q15334 1064 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 GLYCTKQ8IVS8 523 aa14.9□□□□□ -0.02
CIITA-213ENST00000618327 CCDC63Q8NA47 563 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms