RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 DNAJC5GQ8N7S2 189 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 SCINQ9Y6U3 715 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 MCM3APO60318 1980 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 ADGRA2Q96PE1 1338 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 MYH7BA7E2Y1 1941 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 FOSP01100 380 aaPredicted RBP13.1□□□□□ -0.31
SRRT-216ENST00000618262 KARSQ15046 597 aaKnown RBP13.1□□□□□ -0.31
SRRT-216ENST00000618262 ARHGEF6Q15052 776 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 CFAP58Q5T655 872 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 CAPRIN2Q6IMN6 1127 aaKnown RBP13.1□□□□□ -0.31
SRRT-216ENST00000618262 SHC4Q6S5L8 630 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 DTHD1Q6ZMT9 781 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 KIAA1958Q8N8K9 716 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 MAML3Q96JK9 1138 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 CEP63Q96MT8 703 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 SCAND2PQ9GZW5 306 aaPredicted RBP13.1□□□□□ -0.31
SRRT-216ENST00000618262 POLR3EQ9NVU0 708 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 PCDHA12Q9UN75 941 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
SRRT-216ENST00000618262 PFASO15067 1338 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 NR1I2O75469 434 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 OR52Z1P0C646 297 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 PAPOLAP51003 745 aaKnown RBP13.09□□□□□ -0.31
SRRT-216ENST00000618262 USP11P51784 963 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 NDUFA8P51970 172 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 ITGB3BPQ13352 177 aaPredicted RBP13.09□□□□□ -0.31
SRRT-216ENST00000618262 STXBP2Q15833 593 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 VSIG10LQ86VR7 867 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 KIRREL3Q8IZU9 778 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 C4orf32Q8N8J7 132 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 CCDC150Q8NCX0 1101 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 SYMPKQ92797 1274 aaKnown RBP13.09□□□□□ -0.31
SRRT-216ENST00000618262 SFMBT1Q9UHJ3 866 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 IGLV3-22A0A075B6J6 115 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 CCND2P30279 289 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 GBP2P32456 591 aaPredicted RBP13.09□□□□□ -0.31
SRRT-216ENST00000618262 CUL4BQ13620 913 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 ENOX2Q16206 610 aaKnown RBP13.09□□□□□ -0.31
SRRT-216ENST00000618262 MXRA8Q9BRK3 442 aa13.09□□□□□ -0.31
SRRT-216ENST00000618262 FBXO2Q9UK22 296 aaPredicted RBP13.09□□□□□ -0.31
SRRT-216ENST00000618262 EML1O00423 815 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 GAS7O60861 476 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 RNF8O76064 485 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 CYP1A2P05177 515 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 SSBP05455 408 aaKnown RBP eCLIP13.08□□□□□ -0.31
SRRT-216ENST00000618262 FCGRTP55899 365 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 BIRC3Q13489 604 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 GRB14Q14449 540 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 PTPN14Q15678 1187 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 TLDC1Q6P9B6 456 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 KRI1Q8N9T8 703 aaKnown RBP13.08□□□□□ -0.31
SRRT-216ENST00000618262 VPS18Q9P253 973 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 RCOR1Q9UKL0 485 aa13.08□□□□□ -0.31
SRRT-216ENST00000618262 A0A087X0B3 334 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 ADCY6O43306 1168 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 HOXA2O43364 376 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 SASH3O75995 380 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 LBX1P52954 281 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 CTTNQ14247 550 aaKnown RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 KIF22Q14807 665 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 CCBE1Q6UXH8 406 aaPredicted RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 TRIM50Q86XT4 487 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 DHX58Q96C10 678 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 DHTKD1Q96HY7 919 aaPredicted RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 ATP6V0A4Q9HBG4 840 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 ADD3Q9UEY8 706 aaKnown RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 ZNF510Q9Y2H8 683 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 CARNS1A5YM72 827 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 FOXN1O15353 648 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 SNAI1O95863 264 aaPredicted RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 MARK3P27448 753 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 NEK2P51955 445 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 ATP2C1P98194 919 aaPredicted RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 MAP2K5Q13163 448 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 ZNF792Q3KQV3 632 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 PCNX4Q63HM2 1172 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 MAEAQ7L5Y9 396 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 SPATS2Q86XZ4 545 aaKnown RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 RAET1EQ8TD07 263 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 CRYGNQ8WXF5 182 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 TRIB2Q92519 343 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 GLT8D2Q9H1C3 349 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 ZNHIT6Q9NWK9 470 aaKnown RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
SRRT-216ENST00000618262 TCEAL9Q9UHQ7 104 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 DNAI1Q9UI46 699 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 GJD2Q9UKL4 321 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 CASP8AP2Q9UKL3 1982 aa13.08□□□□□ -0.32
SRRT-216ENST00000618262 DNAJC25-GNG10A0A024R161 153 aa13.07□□□□□ -0.32
SRRT-216ENST00000618262 PDLIM1O00151 329 aa13.07□□□□□ -0.32
SRRT-216ENST00000618262 POLR2DO15514 142 aaKnown RBP13.07□□□□□ -0.32
SRRT-216ENST00000618262 SEC31AO94979 1220 aaKnown RBP13.07□□□□□ -0.32
SRRT-216ENST00000618262 LDHAP00338 332 aaKnown RBP13.07□□□□□ -0.32
SRRT-216ENST00000618262 TXNP10599 105 aaKnown RBP13.07□□□□□ -0.32
SRRT-216ENST00000618262 AMPD3Q01432 767 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms