RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 CCDC160A6NGH7 325 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 GOLGA8NF8WBI6 632 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 SORBS3O60504 671 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 GMNNO75496 209 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 PSMC4P43686 418 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 ARL4CP56559 192 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 MYO1EQ12965 1108 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 MKRN3Q13064 507 aaKnown RBP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 KLHDC7AQ5VTJ3 777 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 DARS2Q6PI48 645 aaKnown RBP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 RHOT1Q8IXI2 618 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 TTC39CQ8N584 583 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 TNS2Q63HR2 1409 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 UBE2Q2LH0YL09 131 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 GOLGA8SH3BPF8 625 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 EIF3HO15372 352 aaKnown RBP eCLIP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 ARL1P40616 181 aaPredicted RBP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 PLA2G4AP47712 749 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 GALCP54803 685 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 TNFAIP2Q03169 654 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 CCDC137Q6PK04 289 aaKnown RBP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 CNPY4Q8N129 248 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 NOA1Q8NC60 698 aaKnown RBP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 PYROXD1Q8WU10 500 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 HVCN1Q96D96 273 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 ISCUQ9H1K1 167 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 EPN3Q9H201 632 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 FAM196BA6NMK8 535 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 CAPN9O14815 690 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 PPP1R37O75864 691 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 CPP00450 1065 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 MDH1P40925 334 aaKnown RBP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 BZW1Q7L1Q6 419 aaKnown RBP9.51□□□□□ -0.89
PCDH15-229ENST00000616114 USP38Q8NB14 1042 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 MTRQ99707 1265 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 MED10Q9BTT4 135 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 C2orf40Q9H1Z8 148 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 SERPINA10Q9UK55 444 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 AFF2P51816 1311 aa9.51□□□□□ -0.89
PCDH15-229ENST00000616114 PRPSAP2O60256 369 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 PHF2O75151 1096 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 AGTP01019 485 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 NMT1P30419 496 aaKnown RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 TRIM65Q6PJ69 517 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 SMC1BQ8NDV3 1235 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 CHMP6Q96FZ7 201 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 RAVER2Q9HCJ3 691 aaKnown RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 PACSIN2Q9UNF0 486 aaPredicted RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 PCDHA10Q9Y5I2 948 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 SPATA31A6Q5VVP1 1343 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 CRCPO75575 148 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 ACSL3O95573 720 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 TFDP2Q14188 446 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 KIAA1755Q5JYT7 1200 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 SRLQ86TD4 932 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 SLC35G2Q8TBE7 412 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 LPAR1Q92633 364 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 GRAMD1AQ96CP6 724 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 RIOX1Q9H6W3 641 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 RBM12Q9NTZ6 932 aaKnown RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 MAD1L1Q9Y6D9 718 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 FMN2Q9NZ56 1722 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 LRRC10BA6NIK2 292 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 NOL3O60936 208 aaKnown RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 TRIM49P0CI25 452 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 TRIM49CP0CI26 452 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 PLS3P13797 630 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 NPEPPSP55786 919 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 PRPSAP1Q14558 356 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 KLHL38Q2WGJ6 581 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 TRMT10CQ7L0Y3 403 aaKnown RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 ADGRA1Q86SQ6 560 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 RNF146Q9NTX7 359 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 CLDN3O15551 220 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 PSMA2P25787 234 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 TRIP13Q15645 432 aaPredicted RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 ZNF667Q5HYK9 610 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 NUGGCQ68CJ6 796 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 FAM213AQ9BRX8 229 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 FOXP3Q9BZS1 431 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 EHD4Q9H223 541 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 RGL1Q9NZL6 768 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 CHUKO15111 745 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 GUCY2CP25092 1073 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 ZKSCAN8Q15776 578 aaPredicted RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 TBC1D10BQ4KMP7 808 aaPredicted RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 ELAC2Q9BQ52 826 aaKnown RBP9.5□□□□□ -0.89
PCDH15-229ENST00000616114 SAYSD1Q9NPB0 183 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 L1RE1Q9UN81 338 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 CD2APQ9Y5K6 639 aa9.5□□□□□ -0.89
PCDH15-229ENST00000616114 WDR46O15213 610 aaKnown RBP9.49□□□□□ -0.89
PCDH15-229ENST00000616114 ARL4AP40617 200 aa9.49□□□□□ -0.89
PCDH15-229ENST00000616114 KLK7P49862 253 aa9.49□□□□□ -0.89
PCDH15-229ENST00000616114 MAP7Q14244 749 aa9.49□□□□□ -0.89
PCDH15-229ENST00000616114 DALRD3Q5D0E6 543 aaKnown RBP9.49□□□□□ -0.89
PCDH15-229ENST00000616114 ATG16L1Q676U5 607 aa9.49□□□□□ -0.89
PCDH15-229ENST00000616114 XRRA1Q6P2D8 792 aa9.49□□□□□ -0.89
PCDH15-229ENST00000616114 CCDC117Q8IWD4 279 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms