RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 UBASH3AP57075 661 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 ADAM9Q13443 819 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 KRT31Q15323 416 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 RNF180Q86T96 592 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 ZC3H3Q8IXZ2 948 aaKnown RBP25.73■■□□□ 1.71
CCND3-223ENST00000616010 ANKRD20A12PQ8NF67 263 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 ZNF668Q96K58 619 aaPredicted RBP25.73■■□□□ 1.71
CCND3-223ENST00000616010 HDAC6Q9UBN7 1215 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 EXOC7Q9UPT5 735 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 ABCD1P33897 745 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 HIC1Q14526 733 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 CCSAPQ6IQ19 270 aaPredicted RBP25.73■■□□□ 1.71
CCND3-223ENST00000616010 CEP63Q96MT8 703 aa25.73■■□□□ 1.71
CCND3-223ENST00000616010 TISP43B9A030 160 aa25.72■■□□□ 1.71
CCND3-223ENST00000616010 CCDC173Q0VFZ6 552 aa25.72■■□□□ 1.71
CCND3-223ENST00000616010 TFDP1Q14186 410 aa25.72■■□□□ 1.71
CCND3-223ENST00000616010 SLC9C1Q4G0N8 1177 aa25.72■■□□□ 1.71
CCND3-223ENST00000616010 APTXQ7Z2E3 356 aaKnown RBP25.72■■□□□ 1.71
CCND3-223ENST00000616010 PCSK9Q8NBP7 692 aaKnown RBP25.72■■□□□ 1.71
CCND3-223ENST00000616010 GOLGA5Q8TBA6 731 aa25.72■■□□□ 1.71
CCND3-223ENST00000616010 NAP1L5Q96NT1 182 aaPredicted RBP25.72■■□□□ 1.71
CCND3-223ENST00000616010 MAP7D2Q96T17 732 aa25.72■■□□□ 1.71
CCND3-223ENST00000616010 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.72■■□□□ 1.711e-7■■■■■ 43.3
CCND3-223ENST00000616010 LIMA1Q9UHB6 759 aaKnown RBP25.72■■□□□ 1.71
CCND3-223ENST00000616010 PHLPP2Q6ZVD8 1323 aa25.72■■□□□ 1.71
CCND3-223ENST00000616010 C17orf102A2RUQ5 167 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 MBLAC1A4D2B0 266 aaPredicted RBP25.71■■□□□ 1.71
CCND3-223ENST00000616010 CETN3O15182 167 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 VTNP04004 478 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 LHX8Q68G74 356 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 CDCA2Q69YH5 1023 aaPredicted RBP25.71■■□□□ 1.71
CCND3-223ENST00000616010 PDLIM2Q96JY6 352 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 PPP1R16BQ96T49 567 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 TAB2Q9NYJ8 693 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 TRIP12Q14669 1992 aaPredicted RBP25.71■■□□□ 1.71
CCND3-223ENST00000616010 SCP2P22307 547 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 RPL13P26373 211 aaKnown RBP25.71■■□□□ 1.71
CCND3-223ENST00000616010 STRN3Q13033 797 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 KCNN1Q92952 543 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 MRFAP1L1Q96HT8 127 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 CTAGE1Q96RT6 745 aa25.71■■□□□ 1.71
CCND3-223ENST00000616010 K7ERI5 159 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 HNRNPDLO14979 420 aaKnown RBP25.7■■□□□ 1.7
CCND3-223ENST00000616010 ASAP2O43150 1006 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 CBFA2T2O43439 604 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 MYCP01106 439 aaPredicted RBP25.7■■□□□ 1.7
CCND3-223ENST00000616010 ADAM17P78536 824 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 NBPF20Q3BBV1 942 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 ZBTB8OSQ8IWT0 167 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 BICD1Q96G01 975 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 FAM49AQ9H0Q0 323 aaPredicted RBP25.7■■□□□ 1.7
CCND3-223ENST00000616010 HOXC8P31273 242 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 ZNF200P98182 395 aaPredicted RBP25.7■■□□□ 1.7
CCND3-223ENST00000616010 NFIL3Q16649 462 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 KIAA0319LQ8IZA0 1049 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 UNC93B1Q9H1C4 597 aa25.7■■□□□ 1.7
CCND3-223ENST00000616010 TREHO43280 583 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 HSPA8P11142 646 aaKnown RBP25.69■■□□□ 1.7
CCND3-223ENST00000616010 CYP2C9P11712 490 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 MTIF2P46199 727 aaKnown RBP25.69■■□□□ 1.7
CCND3-223ENST00000616010 CYP2J2P51589 502 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 EFNA5P52803 228 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 COPB1P53618 953 aaKnown RBP25.69■■□□□ 1.7
CCND3-223ENST00000616010 CCDC40Q4G0X9 1142 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 CEP135Q66GS9 1140 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 RUFY4Q6ZNE9 571 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 FILIP1Q7Z7B0 1213 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 C2orf40Q9H1Z8 148 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 TMEM134Q9H6X4 195 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 INTS13Q9NVM9 706 aa25.69■■□□□ 1.7
CCND3-223ENST00000616010 A0A1B0GTH6 734 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 GNAT1P11488 350 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 CBWD1Q9BRT8 395 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 TUBGCP2Q9BSJ2 902 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 VPS16Q9H269 839 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 CGNQ9P2M7 1197 aaKnown RBP25.68■■□□□ 1.7
CCND3-223ENST00000616010 SMIM35A0A1B0GVV1 85 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 ANKRD63C9JTQ0 380 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 GNA14O95837 355 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 TPM3P06753 285 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 PRKCSHP14314 528 aaPredicted RBP25.68■■□□□ 1.7
CCND3-223ENST00000616010 FAM47CQ5HY64 1035 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 ARMCX5Q6P1M9 558 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 PPP1R9BQ96SB3 815 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 CCDC113Q9H0I3 377 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 GTF2IRD1Q9UHL9 959 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 USP20Q9Y2K6 914 aa25.68■■□□□ 1.7
CCND3-223ENST00000616010 AKAP3O75969 853 aa25.67■■□□□ 1.7
CCND3-223ENST00000616010 CASP4P49662 377 aa25.67■■□□□ 1.7
CCND3-223ENST00000616010 ACLYP53396 1101 aa25.67■■□□□ 1.7
CCND3-223ENST00000616010 PTENP60484 403 aa25.67■■□□□ 1.7
CCND3-223ENST00000616010 SNRPFP62306 86 aaKnown RBP25.67■■□□□ 1.7
CCND3-223ENST00000616010 SLC39A4Q6P5W5 647 aa25.67■■□□□ 1.7
CCND3-223ENST00000616010 SCLT1Q96NL6 688 aa25.67■■□□□ 1.7
CCND3-223ENST00000616010 A0A087WZ62 844 aa25.66■■□□□ 1.7
CCND3-223ENST00000616010 LRRC10BA6NIK2 292 aa25.66■■□□□ 1.7
CCND3-223ENST00000616010 N4BP3O15049 544 aa25.66■■□□□ 1.7
CCND3-223ENST00000616010 EDN1P05305 212 aa25.66■■□□□ 1.7
CCND3-223ENST00000616010 CDC25BP30305 580 aa25.66■■□□□ 1.7
CCND3-223ENST00000616010 PHKA2P46019 1235 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms