RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 VPS36Q86VN1 386 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 FAM228AQ86W67 206 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 METTL13Q8N6R0 699 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 ANKS4BQ8N8V4 417 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 CCDC197Q8NCU1 140 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 ANKK1Q8NFD2 765 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 SH3TC2Q8TF17 1288 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 LMBR1Q8WVP7 490 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 ZFPM2Q8WW38 1151 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 DYNLL2Q96FJ2 89 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 XPO6Q96QU8 1125 aaKnown RBP8.47□□□□□ -1.05
MID1-212ENST00000616003 FMO2Q99518 471 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 NT5C3AQ9H0P0 336 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 RAB17Q9H0T7 212 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 TAOK3Q9H2K8 898 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 KCTD10Q9H3F6 313 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 PANK4Q9NVE7 773 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 NAGPAQ9UK23 515 aa8.47□□□□□ -1.05
MID1-212ENST00000616003 NOVA2Q9UNW9 492 aaKnown RBP8.47□□□□□ -1.05
MID1-212ENST00000616003 UTP11Q9Y3A2 253 aaKnown RBP8.47□□□□□ -1.05
MID1-212ENST00000616003 DCDC2CA8MYV0 355 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 DAPK3O43293 454 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 ZNF189O75820 626 aaPredicted RBP8.46□□□□□ -1.05
MID1-212ENST00000616003 GFPT2O94808 682 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 TDP2O95551 362 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 GOLGA8HP0CJ92 632 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 COX10Q12887 443 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 SLC4A8Q2Y0W8 1093 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 ALKBH5Q6P6C2 394 aaKnown RBP8.46□□□□□ -1.05
MID1-212ENST00000616003 CRELD2Q6UXH1 353 aaPredicted RBP8.46□□□□□ -1.05
MID1-212ENST00000616003 IRF2BP2Q7Z5L9 587 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 CPLX4Q7Z7G2 160 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 DDX42Q86XP3 938 aaKnown RBP eCLIP8.46□□□□□ -1.05
MID1-212ENST00000616003 ZNF444Q8N0Y2 327 aaPredicted RBP8.46□□□□□ -1.05
MID1-212ENST00000616003 ATP8B4Q8TF62 1192 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 SPAG5Q96R06 1193 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 CENPOQ9BU64 300 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 AP1M1Q9BXS5 423 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 ANKRD2Q9GZV1 360 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 CCDC134Q9H6E4 229 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 BMP2KQ9NSY1 1161 aaPredicted RBP8.46□□□□□ -1.05
MID1-212ENST00000616003 STXBP5LQ9Y2K9 1186 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 PCDHA2Q9Y5H9 948 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 FOCADQ5VW36 1801 aa8.46□□□□□ -1.05
MID1-212ENST00000616003 A0A1B0GUA9 196 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 LINC00854A0A1B0GVQ3 168 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 FRMD3A2A2Y4 597 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 CFAP73A6NFT4 308 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 ASAP2O43150 1006 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 TTI1O43156 1089 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 SGTAO43765 313 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 RTN3O95197 1032 aaPredicted RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 UCHL3P15374 230 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 IBSPP21815 317 aaPredicted RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 PTENP60484 403 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 GSTO1P78417 241 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 DHX9Q08211 1270 aaKnown RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 RCN1Q15293 331 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 MAPRE1Q15691 268 aaKnown RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 CLUL1Q15846 466 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 TLDC1Q6P9B6 456 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 C16orf86Q6ZW13 317 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 CROCCP2Q86T23 111 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 CEP57Q86XR8 500 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 SLC44A5Q8NCS7 719 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 SH3RF3Q8TEJ3 882 aaPredicted RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 ATXN2LQ8WWM7 1075 aaKnown RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 HOOK2Q96ED9 719 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 PGM2Q96G03 612 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 HES6Q96HZ4 224 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 ZNF317Q96PQ6 595 aaPredicted RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 NAP1L3Q99457 506 aaPredicted RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 NSRP1Q9H0G5 558 aaKnown RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 CCDC68Q9H2F9 335 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 GOLPH3Q9H4A6 298 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 RIOX1Q9H6W3 641 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 ZNF304Q9HCX3 659 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.46□□□□□ -1.06
MID1-212ENST00000616003 PCSK1NQ9UHG2 260 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 AMACRQ9UHK6 382 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 HDAC9Q9UKV0 1011 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 AFF2P51816 1311 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 PITPNM2Q9BZ72 1349 aa8.46□□□□□ -1.06
MID1-212ENST00000616003 COL16A1Q07092 1604 aaPredicted RBP8.46□□□□□ -1.06
MID1-212ENST00000616003 GOLGA6L10A0A0M3HER8 536 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 CARNS1A5YM72 827 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 CCT8L1PA6NM43 557 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 F8W031 263 aaPredicted RBP8.45□□□□□ -1.06
MID1-212ENST00000616003 CETN3O15182 167 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 CTNND1O60716 968 aaKnown RBP8.45□□□□□ -1.06
MID1-212ENST00000616003 ATP6V1G2O95670 118 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 AFPP02771 609 aaKnown RBP8.45□□□□□ -1.06
MID1-212ENST00000616003 SSBP05455 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
MID1-212ENST00000616003 H2AFZP0C0S5 128 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 YY1P25490 414 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 GBP1P32455 592 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 RANBP1P43487 201 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 MMP13P45452 471 aa8.45□□□□□ -1.06
MID1-212ENST00000616003 NOVP48745 357 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms