RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 PTPN21Q16825 1174 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 MAGOHBQ96A72 148 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 PBKQ96KB5 322 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 PPP1R13BQ96KQ4 1090 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 C17orf75Q9HAS0 396 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 HOMER3Q9NSC5 361 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 HSPBP1Q9NZL4 362 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 EMSYQ7Z589 1322 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 RIC1Q4ADV7 1423 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 C17orf102A2RUQ5 167 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 RHOBTB3O94955 611 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 DNAJC21Q5F1R6 531 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 ZNF484Q5JVG2 852 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 PCNX4Q63HM2 1172 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 METTL16Q86W50 562 aaKnown RBP10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 ARRDC4Q8NCT1 418 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 CCNYQ8ND76 341 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 SMC1BQ8NDV3 1235 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 CALN1Q9BXU9 219 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 RSPH14Q9UHP6 348 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 POLIQ9UNA4 740 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 IGSF9BQ9UPX0 1349 aa10.14□□□□□ -0.79
CLTCL1-208ENST00000615606 A8MXQ7 604 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 ATP2C2O75185 946 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 PSMA2P25787 234 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 PPIL2Q13356 520 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 BZW1Q7L1Q6 419 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 PCSK9Q8NBP7 692 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 TNIP3Q96KP6 325 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 SPTLC3Q9NUV7 552 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 LRRD1A4D1F6 860 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 GOLGA8CPA6NN73 597 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 PGRMC1O00264 195 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 FOXN1O15353 648 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 EIF3DO15371 548 aaKnown RBP eCLIP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 TFRCP02786 760 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 PGK2P07205 417 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 INHBEP58166 350 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 RBP5P82980 135 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 ELF2Q15723 593 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 TRIM72Q6ZMU5 477 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 ZC3H15Q8WU90 426 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 ANKS1AQ92625 1134 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 SH2D3AQ9BRG2 576 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 UNC45AQ9H3U1 944 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 PXMP2Q9NR77 195 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 NALCNQ8IZF0 1738 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 MYMKA6NI61 221 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 SOWAHDA6NJG2 315 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 SGK1O00141 431 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 KPNA6O60684 536 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 TRIM49P0CI25 452 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 TRIM49CP0CI26 452 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 ACRBPQ8NEB7 543 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 SYTL5Q8TDW5 730 aaPredicted RBP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 CCDC68Q9H2F9 335 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 KIF9Q9HAQ2 790 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 SLC38A7Q9NVC3 462 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 CDC23Q9UJX2 597 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 JRKLQ9Y4A0 524 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 VWA5AO00534 786 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 ZNF18P17022 549 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 CAPN2P17655 700 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 DPYDQ12882 1025 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 SGO2Q562F6 1265 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 NAA35Q5VZE5 725 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 PPP2R3CQ969Q6 453 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 EDEM3Q9BZQ6 932 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 NGRNQ9NPE2 291 aaKnown RBP10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 FAM198AQ9UFP1 575 aa10.13□□□□□ -0.79
CLTCL1-208ENST00000615606 ROBO1Q9Y6N7 1651 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 M0QYV0 167 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 IL18RAPO95256 599 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 CYP11B2P19099 503 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 GNA15P30679 374 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 SLC26A2P50443 739 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 RHBDL3P58872 404 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 VEPH1Q14D04 833 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 SETDB1Q15047 1291 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 BRD3Q15059 726 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 EDRF1Q3B7T1 1238 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 HHATQ5VTY9 493 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 RPUSD2Q8IZ73 545 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 FBXL16Q8N461 479 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 FBF1Q8TES7 1133 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 TRIM62Q9BVG3 475 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 DPH5Q9H2P9 285 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 CNOT8Q9UFF9 292 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 STAP1Q9ULZ2 295 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 PARP4Q9UKK3 1724 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 SPDYE16A6NNV3 312 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 A6NNZ2 444 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 NPM3O75607 178 aaKnown RBP10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 ITGA4P13612 1032 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 CPB1P15086 417 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 PTPRAP18433 802 aa10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 HPDP32754 393 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 DRAP1Q14919 205 aaPredicted RBP10.12□□□□□ -0.79
CLTCL1-208ENST00000615606 MAP7D1Q3KQU3 841 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms