RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SFNP31947 248 aa9.56□□□□□ -0.88
VPS11-206ENST00000614944 STAT6P42226 847 aa9.56□□□□□ -0.88
VPS11-206ENST00000614944 ZNF75DP51815 510 aa9.56□□□□□ -0.88
VPS11-206ENST00000614944 MRPS9P82933 396 aaKnown RBP9.56□□□□□ -0.88
VPS11-206ENST00000614944 EPHA7Q15375 998 aa9.56□□□□□ -0.88
VPS11-206ENST00000614944 MAP7D1Q3KQU3 841 aa9.56□□□□□ -0.88
VPS11-206ENST00000614944 B4GALNT4Q76KP1 1039 aa9.56□□□□□ -0.88
VPS11-206ENST00000614944 GIMAP8Q8ND71 665 aaPredicted RBP9.56□□□□□ -0.88
VPS11-206ENST00000614944 TEKT3Q9BXF9 490 aa9.56□□□□□ -0.88
VPS11-206ENST00000614944 BTBD19C9JJ37 291 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 LIN7AO14910 233 aaPredicted RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 DHX15O43143 795 aaKnown RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 N4BP1O75113 896 aaKnown RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 ERCC5P28715 1186 aaPredicted RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 TECP42680 631 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 ERVK-9P63128 1117 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 ERVK-24P63145 666 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 BAATQ14032 418 aaPredicted RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 SLMAPQ14BN4 828 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 PLCB4Q15147 1175 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 FAM110CQ1W6H9 321 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 RGMBQ6NW40 437 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 SPATS2Q86XZ4 545 aaKnown RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 RAD54LQ92698 747 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 TAAR1Q96RJ0 339 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 RMDN3Q96TC7 470 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 ZWILCHQ9H900 591 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 GALNT8Q9NY28 637 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 MGAMO43451 1857 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 CCL15-CCL14A0A0B4J2E2 113 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 FAM155AB1AL88 458 aaPredicted RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 SPATA31C2B4DYI2 1134 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 BOLA2-SMG1P6H3BVE0 249 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 PDHXO00330 501 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 TGFB3P10600 412 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 ITGB5P18084 799 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 ZNF76P36508 570 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 TXKP42681 527 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 TM4SF4P48230 202 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 JAK3P52333 1124 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 CCL15Q16663 113 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 PRR16Q569H4 304 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 ZNF746Q6NUN9 644 aaPredicted RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 CPXCR1Q8N123 301 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 GPRC5AQ8NFJ5 357 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 HSD17B14Q9BPX1 270 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 TUBA8Q9NY65 449 aaPredicted RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 SEL1LQ9UBV2 794 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 CROTQ9UKG9 612 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 PHACTR2O75167 634 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 RHOBTB3O94955 611 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 BDNFP23560 247 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 PSMD7P51665 324 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 NEK2P51955 445 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 KRT76Q01546 638 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 DMPKQ09013 629 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 ARHGEF16Q5VV41 709 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 TIPINQ9BVW5 301 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 CARD6Q9BX69 1037 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 MAK16Q9BXY0 300 aaKnown RBP9.55□□□□□ -0.88
VPS11-206ENST00000614944 BLOC1S4Q9NUP1 217 aa9.55□□□□□ -0.88
VPS11-206ENST00000614944 ABL1P00519 1130 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 NR3C2P08235 984 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 PLCG1P19174 1290 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 MCM3P25205 808 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 HOXD10P28358 340 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 ALDH5A1P51649 535 aaPredicted RBP9.54□□□□□ -0.88
VPS11-206ENST00000614944 KCNA1Q09470 495 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 SREBF2Q12772 1141 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 CBX3Q13185 183 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 CCDC38Q502W7 563 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 SARM1Q6SZW1 724 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 FCHSD1Q86WN1 690 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 DHX58Q96C10 678 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 DKC1O60832 514 aaKnown RBP eCLIP9.54□□□□□ -0.88
VPS11-206ENST00000614944 MAPK4P31152 587 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 EHHADHQ08426 723 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 ZNF577Q9BSK1 485 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 GBP3Q9H0R5 595 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 EPC1Q9H2F5 836 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 LUC7LQ9NQ29 371 aaKnown RBP9.54□□□□□ -0.88
VPS11-206ENST00000614944 DBR1Q9UK59 544 aaKnown RBP9.54□□□□□ -0.88
VPS11-206ENST00000614944 MAN1B1Q9UKM7 699 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 MEFVO15553 781 aaPredicted RBP9.54□□□□□ -0.88
VPS11-206ENST00000614944 LINGO3P0C6S8 592 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 SPATA31C1P0DKV0 1188 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 MTMR1Q13613 665 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 CAMK4Q16566 473 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 MAMDC4Q6UXC1 1216 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 UBE2Q1Q7Z7E8 422 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 LCA5Q86VQ0 697 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 ZBTB8BQ8NAP8 495 aaPredicted RBP9.54□□□□□ -0.88
VPS11-206ENST00000614944 SNX29Q8TEQ0 813 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 DYDC1Q8WWB3 177 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 LARP4BQ92615 738 aaKnown RBP9.54□□□□□ -0.88
VPS11-206ENST00000614944 TCHPQ9BT92 498 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 PCDH18Q9HCL0 1135 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 SLC40A1Q9NP59 571 aa9.54□□□□□ -0.88
VPS11-206ENST00000614944 KCNH7Q9NS40 1196 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms