RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 F8W8V4 182 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 MTMR2Q13614 643 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 UHMK1Q8TAS1 419 aaKnown RBP15.76■□□□□ 0.11
SNPH-203ENST00000614659 RFFLQ8WZ73 363 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 MSTO1Q9BUK6 570 aa15.76■□□□□ 0.11
SNPH-203ENST00000614659 MAGEA9P43362 315 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 RBBP5Q15291 538 aaKnown RBP15.75■□□□□ 0.11
SNPH-203ENST00000614659 COG1Q8WTW3 980 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 SYN2Q92777 582 aaPredicted RBP15.75■□□□□ 0.11
SNPH-203ENST00000614659 SPATA33Q96N06 139 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 MID2Q9UJV3 735 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 SNX12Q9UMY4 172 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 OPHN1O60890 802 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 ZNF189O75820 626 aaPredicted RBP15.75■□□□□ 0.11
SNPH-203ENST00000614659 TMED2Q15363 201 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 EDRF1Q3B7T1 1238 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 XRRA1Q6P2D8 792 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 SLC44A5Q8NCS7 719 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 DYDC2Q96IM9 177 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 VCX3AQ9NNX9 186 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 STRIP2Q9ULQ0 834 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 TTC19Q6DKK2 380 aaPredicted RBP15.75■□□□□ 0.11
SNPH-203ENST00000614659 ZNF449Q6P9G9 518 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 BZW1Q7L1Q6 419 aaKnown RBP15.75■□□□□ 0.11
SNPH-203ENST00000614659 TC2NQ8N9U0 490 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 MTRQ99707 1265 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 AGXT2Q9BYV1 514 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 IQANK1A0A1B0GTG1 560 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 ZBBXA8MT70 800 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 STXBP3O00186 592 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 CPP00450 1065 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 EPHX2P34913 555 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 SOX5P35711 763 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 GGCXP38435 758 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 PEX19P40855 299 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 VAMP7P51809 220 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 NUDT12Q9BQG2 462 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 MTMR4Q9NYA4 1195 aa15.75■□□□□ 0.11
SNPH-203ENST00000614659 SNAP23O00161 211 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 PDE1CQ14123 709 aaPredicted RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 STAG2Q8N3U4 1231 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 DDX27Q96GQ7 796 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 LRRC4Q9HBW1 653 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 EXOC1LA0A1B0GW35 172 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 TDP2O95551 362 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 MYCP01106 439 aaPredicted RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 FXR2P51116 673 aaKnown RBP eCLIP15.74■□□□□ 0.11
SNPH-203ENST00000614659 PEX3P56589 373 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 SNRPFP62306 86 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 ZNF543Q08ER8 600 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 SNX1Q13596 522 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 INTS5Q6P9B9 1019 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 NLRP4Q96MN2 994 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 WDR24Q96S15 920 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 GCLCP48506 637 aaPredicted RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 KPNA2P52292 529 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 TFAMQ00059 246 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 NFX1Q12986 1120 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 OR6J1Q8NGC5 347 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 FUCA2Q9BTY2 467 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 FLT1P17948 1338 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 SRGAP2O75044 1071 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 ATP5HO75947 161 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 MT-ND3P03897 115 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 RPLP2P05387 115 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 HNRNPH2P55795 449 aaKnown RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 CDC42EP5Q6NZY7 148 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 USP17L6PQ6QN14 398 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 LRIG3Q6UXM1 1119 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 SYDE1Q6ZW31 735 aaPredicted RBP15.74■□□□□ 0.11
SNPH-203ENST00000614659 BEST2Q8NFU1 509 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 IL17RAQ96F46 866 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 PFDN4Q9NQP4 134 aa15.74■□□□□ 0.11
SNPH-203ENST00000614659 PSMC5P62195 406 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 KCTD6Q8NC69 237 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 EIF2AK1Q9BQI3 630 aaKnown RBP15.73■□□□□ 0.11
SNPH-203ENST00000614659 CNOT8Q9UFF9 292 aaKnown RBP15.73■□□□□ 0.11
SNPH-203ENST00000614659 TPX2Q9ULW0 747 aaKnown RBP15.73■□□□□ 0.11
SNPH-203ENST00000614659 ATP1A1P05023 1023 aaKnown RBP15.73■□□□□ 0.11
SNPH-203ENST00000614659 DEFB129Q9H1M3 183 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 PP2D1A8MPX8 630 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 SRGAP2CP0DJJ0 459 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 MARK3P27448 753 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 ARL4AP40617 200 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 TSPY1Q01534 308 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 IFRD2Q12894 506 aaPredicted RBP15.73■□□□□ 0.11
SNPH-203ENST00000614659 MUM1L1Q5H9M0 696 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 SIX6OS1Q8N1H7 587 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 ARHGAP42A6NI28 874 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 SH3BP5O60239 455 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 PRPSAP2O60256 369 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 GH1P01241 217 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 IFNAR2P48551 515 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 PTPAQ15257 358 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 NFRKBQ6P4R8 1299 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 LDHDQ86WU2 507 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 HPSEQ9Y251 543 aa15.73■□□□□ 0.11
SNPH-203ENST00000614659 TAP1Q03518 808 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms