RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 TOX2Q96NM4 488 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 TSPYL1Q9H0U9 437 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 RNF208Q9H0X6 261 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 ADAMTS10Q9H324 1103 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 KCTD10Q9H3F6 313 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 TMEM206Q9H813 350 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 SUCLA2Q9P2R7 463 aaPredicted RBP6.88□□□□□ -1.31
CBWD3-210ENST00000614398 HDAC6Q9UBN7 1215 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 STYXL1Q9Y6J8 313 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 RALGAPA2Q2PPJ7 1873 aa6.88□□□□□ -1.31
CBWD3-210ENST00000614398 ZMYM2Q9UBW7 1377 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 MAPK13O15264 365 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 ZNF500O60304 480 aaPredicted RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 PTMAP06454 111 aaKnown RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CD44P16070 742 aaKnown RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 PRCPP42785 496 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 IRX5P78411 483 aaPredicted RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 LAMTOR4Q0VGL1 99 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CAPSQ13938 189 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 HIC1Q14526 733 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 DHX8Q14562 1220 aaKnown RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 ANO6Q4KMQ2 910 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CXCL17Q6UXB2 119 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 ZPBP2Q6X784 338 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 ANKRD33Q7Z3H0 272 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 UBE2Q1Q7Z7E8 422 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 U2AF1L4Q8WU68 220 aaKnown RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 P2RX5Q93086 422 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 PRIMPOLQ96LW4 560 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 DEFB118Q96PH6 123 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 ACCSQ96QU6 501 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CTAGE1Q96RT6 745 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 EXOC7Q9UPT5 735 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 A0A087WWV3 80 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 SMTNL1A8MU46 457 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 GPR32O75388 356 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CD4P01730 458 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CYP2C9P11712 490 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 HOXD13P35453 343 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 PHKA2P46019 1235 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 GPC3P51654 580 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 MGAT3Q09327 533 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 PAK1Q13153 545 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 KNOP1Q1ED39 458 aaKnown RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 SMYD5Q6GMV2 418 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 TTI2Q6NXR4 508 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 C11orf57Q6ZUT1 292 aaPredicted RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 HAUS6Q7Z4H7 955 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 RSPH3Q86UC2 560 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 ZBTB8OSQ8IWT0 167 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CCDC155Q8N6L0 562 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 PRPF31Q8WWY3 499 aaKnown RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CCDC51Q96ER9 411 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 CEP63Q96MT8 703 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 MCOLN1Q9GZU1 580 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 FZD8Q9H461 694 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 MRPL44Q9H9J2 332 aaKnown RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 KMT5AQ9NQR1 393 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
CBWD3-210ENST00000614398 SETD4Q9NVD3 440 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 TBC1D7Q9P0N9 293 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 GDAQ9Y2T3 454 aa6.87□□□□□ -1.31
CBWD3-210ENST00000614398 EVPLQ92817 2033 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 SLC16A3O15427 465 aaKnown RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 AXLP30530 894 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 PSEN1P49768 467 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 MARSP56192 900 aaKnown RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 MYL5Q02045 173 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 NCAPHQ15003 741 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 TPRNQ4KMQ1 711 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 SPATA1Q5VX52 437 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 GDF6Q6KF10 455 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 DEPTORQ8TB45 409 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 CAGE1Q8TC20 777 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 TRAPPC12Q8WVT3 735 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 ERCC4Q92889 916 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 MKNK1Q9BUB5 465 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 INO80BQ9C086 356 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 GPRC5CQ9NQ84 441 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 STARD7Q9NQZ5 370 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 PRMT7Q9NVM4 692 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 DMAC2Q9NW81 257 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 GEMIN8Q9NWZ8 242 aaKnown RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 TBX20Q9UMR3 447 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 ADGRA3Q8IWK6 1321 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 CNTNAP2Q9UHC6 1331 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 TRIP12Q14669 1992 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 VGLL3A8MV65 326 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 K7ENM7 598 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 BIN1O00499 593 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 CALUO43852 315 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 PARNO95453 639 aaKnown RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 FGFR1OPO95684 399 aaKnown RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 MYBP10242 640 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 GARTP22102 1010 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 PROZP22891 400 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 ZNF165P49910 485 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 CASP5P51878 434 aa6.86□□□□□ -1.31
CBWD3-210ENST00000614398 CRYBB1P53674 252 aaPredicted RBP6.86□□□□□ -1.31
CBWD3-210ENST00000614398 PEX3P56589 373 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms