RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 MCM7P33993 719 aa25.34■■□□□ 1.65
FAM228B-208ENST00000613899 ORC2Q13416 577 aaPredicted RBP25.34■■□□□ 1.65
FAM228B-208ENST00000613899 SMAD4Q13485 552 aaKnown RBP25.34■■□□□ 1.65
FAM228B-208ENST00000613899 FERMT3Q86UX7 667 aa25.34■■□□□ 1.65
FAM228B-208ENST00000613899 FAM184AQ8NB25 1140 aa25.34■■□□□ 1.65
FAM228B-208ENST00000613899 CDCA3Q99618 268 aaPredicted RBP25.34■■□□□ 1.65
FAM228B-208ENST00000613899 TLE6Q9H808 572 aa25.34■■□□□ 1.65
FAM228B-208ENST00000613899 CD207Q9UJ71 328 aa25.34■■□□□ 1.65
FAM228B-208ENST00000613899 PCDHGC5Q9Y5F6 944 aa25.34■■□□□ 1.65
FAM228B-208ENST00000613899 CARNS1A5YM72 827 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 FSCN2O14926 492 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 ZBTB39O15060 712 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 DGAT1O75907 488 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 ATP2B1P20020 1258 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 KRT17Q04695 432 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 MXD4Q14582 209 aaPredicted RBP25.33■■□□□ 1.65
FAM228B-208ENST00000613899 CLUL1Q15846 466 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 RBM23Q86U06 439 aaKnown RBP25.33■■□□□ 1.65
FAM228B-208ENST00000613899 RNF149Q8NC42 400 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 FBXO18Q8NFZ0 1043 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 CD320Q9NPF0 282 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 XPNPEP1Q9NQW7 623 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 SPG21Q9NZD8 308 aa25.33■■□□□ 1.65
FAM228B-208ENST00000613899 POTEMA6NI47 508 aa25.32■■□□□ 1.64
FAM228B-208ENST00000613899 MBTPS2O43462 519 aa25.32■■□□□ 1.64
FAM228B-208ENST00000613899 ZNF623O75123 536 aa25.32■■□□□ 1.64
FAM228B-208ENST00000613899 RBM25P49756 843 aaKnown RBP25.32■■□□□ 1.64
FAM228B-208ENST00000613899 ERVFC1P60507 584 aa25.32■■□□□ 1.64
FAM228B-208ENST00000613899 GNL2Q13823 731 aaKnown RBP25.32■■□□□ 1.64
FAM228B-208ENST00000613899 PCBP1Q15365 356 aaKnown RBP eCLIP25.32■■□□□ 1.64
FAM228B-208ENST00000613899 SMAD2Q15796 467 aaKnown RBP25.32■■□□□ 1.64
FAM228B-208ENST00000613899 GLB1LQ6UWU2 654 aa25.32■■□□□ 1.64
FAM228B-208ENST00000613899 PGBD4Q96DM1 585 aa25.32■■□□□ 1.64
FAM228B-208ENST00000613899 TMEM60Q9H2L4 133 aa25.32■■□□□ 1.64
FAM228B-208ENST00000613899 ENTPD7Q9NQZ7 604 aa25.32■■□□□ 1.64
FAM228B-208ENST00000613899 PBX3P40426 434 aa25.31■■□□□ 1.64
FAM228B-208ENST00000613899 ALDH7A1P49419 539 aaKnown RBP25.31■■□□□ 1.64
FAM228B-208ENST00000613899 TFDP1Q14186 410 aa25.31■■□□□ 1.64
FAM228B-208ENST00000613899 ADHFE1Q8IWW8 467 aa25.31■■□□□ 1.64
FAM228B-208ENST00000613899 SLC39A11Q8N1S5 342 aa25.31■■□□□ 1.64
FAM228B-208ENST00000613899 LPPQ93052 612 aa25.31■■□□□ 1.64
FAM228B-208ENST00000613899 MSLNLQ96KJ4 702 aa25.31■■□□□ 1.64
FAM228B-208ENST00000613899 TCF25Q9BQ70 676 aa25.31■■□□□ 1.64
FAM228B-208ENST00000613899 MINDY3Q9H8M7 445 aa25.31■■□□□ 1.64
FAM228B-208ENST00000613899 NGRNQ9NPE2 291 aaKnown RBP25.31■■□□□ 1.64
FAM228B-208ENST00000613899 ERLIN2O94905 339 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 RARRES1P49788 294 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 ZP2Q05996 745 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 RABEP1Q15276 862 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 DUSP6Q16828 381 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 PLPP4Q5VZY2 271 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 NOSTRINQ8IVI9 506 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 POP1Q99575 1024 aaKnown RBP25.3■■□□□ 1.64
FAM228B-208ENST00000613899 EPHX3Q9H6B9 360 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 TUFT1Q9NNX1 390 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 PCDHB2Q9Y5E7 798 aa25.3■■□□□ 1.64
FAM228B-208ENST00000613899 EYA4O95677 639 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 GLP2RO95838 553 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 OR52Z1P0C646 297 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 SRGAP2BP0DMP2 458 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 XRCC6P12956 609 aaKnown RBP eCLIP25.29■■□□□ 1.64
FAM228B-208ENST00000613899 TRAPPC10P48553 1259 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 BCAR1P56945 870 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 POU5F1BQ06416 359 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 COASYQ13057 564 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 NOMO2Q5JPE7 1267 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 SMRP1Q8NCR6 262 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 CLEC1BQ9P126 229 aa25.29■■□□□ 1.64
FAM228B-208ENST00000613899 NOL7Q9UMY1 257 aaKnown RBP25.29■■□□□ 1.64
FAM228B-208ENST00000613899 ZC3H11AO75152 810 aaKnown RBP eCLIP25.28■■□□□ 1.64
FAM228B-208ENST00000613899 AXLP30530 894 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 PTENP60484 403 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 LONRF3Q496Y0 759 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 TTC38Q5R3I4 469 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 TMC7Q7Z402 723 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 IFNLR1Q8IU57 520 aaPredicted RBP25.28■■□□□ 1.64
FAM228B-208ENST00000613899 ERMNQ8TAM6 284 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 PIGOQ8TEQ8 1089 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 KHSRPQ92945 711 aaKnown RBP eCLIP25.28■■□□□ 1.64
FAM228B-208ENST00000613899 TMEM169Q96HH4 297 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 TBC1D13Q9NVG8 400 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 BARX2Q9UMQ3 279 aaPredicted RBP25.28■■□□□ 1.64
FAM228B-208ENST00000613899 INPP5FQ9Y2H2 1132 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 CNTNAP2Q9UHC6 1331 aa25.28■■□□□ 1.64
FAM228B-208ENST00000613899 PI4K2BG5E9Z4 385 aa25.27■■□□□ 1.64
FAM228B-208ENST00000613899 PER2O15055 1255 aa25.27■■□□□ 1.64
FAM228B-208ENST00000613899 ST18O60284 1047 aa25.27■■□□□ 1.64
FAM228B-208ENST00000613899 HOXA11P31270 313 aaPredicted RBP25.27■■□□□ 1.64
FAM228B-208ENST00000613899 RNASELQ05823 741 aaKnown RBP25.27■■□□□ 1.64
FAM228B-208ENST00000613899 NCBP1Q09161 790 aaKnown RBP25.27■■□□□ 1.64
FAM228B-208ENST00000613899 BMS1Q14692 1282 aaKnown RBP25.27■■□□□ 1.64
FAM228B-208ENST00000613899 ZNF174Q15697 407 aa25.27■■□□□ 1.64
FAM228B-208ENST00000613899 CNNM3Q8NE01 707 aa25.27■■□□□ 1.64
FAM228B-208ENST00000613899 URGCPQ8TCY9 931 aa25.27■■□□□ 1.64
FAM228B-208ENST00000613899 CCDC51Q96ER9 411 aa25.27■■□□□ 1.64
FAM228B-208ENST00000613899 POLR3CQ9BUI4 534 aaPredicted RBP25.27■■□□□ 1.64
FAM228B-208ENST00000613899 C19orf67A6NJJ6 358 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 MEIS3P2A8K0S8 358 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 INO80B-WBP1J3KQ70 363 aa25.26■■□□□ 1.63
FAM228B-208ENST00000613899 USO1O60763 962 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms