RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ZNF618Q5T7W0 954 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 CDCA2Q69YH5 1023 aaPredicted RBP16.19■□□□□ 0.18
CD48-203ENST00000613788 ISM2Q6H9L7 571 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 TMEM161BQ8NDZ6 487 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 KCNN1Q92952 543 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 ZNF668Q96K58 619 aaPredicted RBP16.19■□□□□ 0.18
CD48-203ENST00000613788 TMEM134Q9H6X4 195 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 IFT122Q9HBG6 1241 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 DENND3A2RUS2 1198 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 INO80B-WBP1J3KQ70 363 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 EIF3DO15371 548 aaKnown RBP eCLIP16.19■□□□□ 0.18
CD48-203ENST00000613788 CHRNA1P02708 482 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 CTSHP09668 335 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 SELPP16109 830 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 EIF4BP23588 611 aaKnown RBP16.19■□□□□ 0.18
CD48-203ENST00000613788 PPP1R2P41236 205 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 GTF2BQ00403 316 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 MGAT3Q09327 533 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 STRN3Q13033 797 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 PCBP1Q15365 356 aaKnown RBP eCLIP16.19■□□□□ 0.18
CD48-203ENST00000613788 ZSCAN23Q3MJ62 389 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 HVCN1Q96D96 273 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 OSMRQ99650 979 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 KIFC3Q9BVG8 833 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 HIPK3Q9H422 1215 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 CDHR5Q9HBB8 845 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 SQORQ9Y6N5 450 aa16.19■□□□□ 0.18
CD48-203ENST00000613788 ADGRA3Q8IWK6 1321 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 PARNO95453 639 aaKnown RBP16.18■□□□□ 0.18
CD48-203ENST00000613788 DARSP14868 501 aaKnown RBP16.18■□□□□ 0.18
CD48-203ENST00000613788 NLRP12P59046 1061 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 STIM1Q13586 685 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 MAPK6Q16659 721 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 MYOCDQ8IZQ8 938 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 USP38Q8NB14 1042 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 MLKLQ8NB16 471 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 KIAA0895Q8NCT3 520 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 ZNF507Q8TCN5 953 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 ANP32EQ9BTT0 268 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 NOC4LQ9BVI4 516 aaKnown RBP16.18■□□□□ 0.18
CD48-203ENST00000613788 STRA6Q9BX79 667 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 PRMT7Q9NVM4 692 aaPredicted RBP16.18■□□□□ 0.18
CD48-203ENST00000613788 TBX21Q9UL17 535 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 TBX20Q9UMR3 447 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 GDAQ9Y2T3 454 aa16.18■□□□□ 0.18
CD48-203ENST00000613788 SYCE3A1L190 88 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 PPP1R37O75864 691 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 MYBP10242 640 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 CASP5P51878 434 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 NCBP1Q09161 790 aaKnown RBP16.17■□□□□ 0.18
CD48-203ENST00000613788 ZC2HC1CQ53FD0 456 aaPredicted RBP16.17■□□□□ 0.18
CD48-203ENST00000613788 COBLL1Q53SF7 1204 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 LRRC8DQ7L1W4 858 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 EPM2AIP1Q7L775 607 aaPredicted RBP16.17■□□□□ 0.18
CD48-203ENST00000613788 GUF1Q8N442 669 aaKnown RBP16.17■□□□□ 0.18
CD48-203ENST00000613788 FGFBP2Q9BYJ0 223 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 GZF1Q9H116 711 aaPredicted RBP16.17■□□□□ 0.18
CD48-203ENST00000613788 TMEM206Q9H813 350 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 DACH1Q9UI36 760 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 EXOC7Q9UPT5 735 aa16.17■□□□□ 0.18
CD48-203ENST00000613788 UBE4BO95155 1302 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 KIAA0355O15063 1070 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 BMP6P22004 513 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 SFPQP23246 707 aaKnown RBP eCLIP16.16■□□□□ 0.18
CD48-203ENST00000613788 MBTD1Q05BQ5 628 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 L1TD1Q5T7N2 865 aaKnown RBP16.16■□□□□ 0.18
CD48-203ENST00000613788 SCFD1Q8WVM8 642 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 PRIMPOLQ96LW4 560 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 ACCSQ96QU6 501 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 CCDC113Q9H0I3 377 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 FZD8Q9H461 694 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 PRDM5Q9NQX1 630 aaPredicted RBP16.16■□□□□ 0.18
CD48-203ENST00000613788 ANO10Q9NW15 660 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 PRKAG2Q9UGJ0 569 aa16.16■□□□□ 0.18
CD48-203ENST00000613788 MYH11P35749 1972 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 ACKR2O00590 384 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 GPR182O15218 404 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 RPS6KA5O75582 802 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 ERLIN2O94905 339 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 PRPF6O94906 941 aaKnown RBP16.15■□□□□ 0.18
CD48-203ENST00000613788 PRKCBP05771 671 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 IQCF3P0C7M6 154 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 PRCPP42785 496 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 STX1AQ16623 288 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 FAM187BQ17R55 369 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 BMT2Q1RMZ1 405 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 FBXO47Q5MNV8 452 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 TRAF7Q6Q0C0 670 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 MAP4K3Q8IVH8 894 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 SMYD4Q8IYR2 804 aaPredicted RBP16.15■□□□□ 0.18
CD48-203ENST00000613788 SYCP3Q8IZU3 236 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 GLIS3Q8NEA6 775 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 PPP1R12CQ9BZL4 782 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 MINDY3Q9H8M7 445 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 MAPK8IP1Q9UQF2 711 aa16.15■□□□□ 0.18
CD48-203ENST00000613788 PSMA7O14818 248 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 EVI5O60447 810 aa16.14■□□□□ 0.18
CD48-203ENST00000613788 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.18
CD48-203ENST00000613788 TIMP1P01033 207 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms