RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	TPCN1	Q9ULQ1	816 aa		12.47	□□□□□ -0.41
CBWD1-222	ENST00000613508	PIN4	Q9Y237	131 aa	Known RBP	12.47	□□□□□ -0.41
CBWD1-222	ENST00000613508	COL4A3BP	Q9Y5P4	624 aa		12.47	□□□□□ -0.41
CBWD1-222	ENST00000613508	USP34	Q70CQ2	3546 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	TMEM221	A6NGB7	291 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508		M0R296	226 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	NPEPPS	P55786	919 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	NHLH1	Q02575	133 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	ITIH3	Q06033	890 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	GIT2	Q14161	759 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	BMS1	Q14692	1282 aa	Known RBP	12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	PCBP1	Q15365	356 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	EPHA7	Q15375	998 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	TPRN	Q4KMQ1	711 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	NOMO2	Q5JPE7	1267 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	PLA2G4F	Q68DD2	849 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	CATSPER4	Q7RTX7	472 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	SRGAP1	Q7Z6B7	1085 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	MRPL10	Q7Z7H8	261 aa	Known RBP	12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	DDX53	Q86TM3	631 aa	Known RBP	12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	KSR1	Q8IVT5	923 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	PRPF31	Q8WWY3	499 aa	Known RBP	12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	TMEM169	Q96HH4	297 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	IGSF21	Q96ID5	467 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	RPGRIP1	Q96KN7	1286 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	FBXL18	Q96ME1	805 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	NECTIN4	Q96NY8	510 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	ZBP1	Q9H171	429 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	SLK	Q9H2G2	1235 aa	Predicted RBP	12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	ADAM7	Q9H2U9	754 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	TBC1D13	Q9NVG8	400 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	STK39	Q9UEW8	545 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	HCFC2	Q9Y5Z7	792 aa		12.46	□□□□□ -0.41
CBWD1-222	ENST00000613508	CLASP2	O75122	1294 aa	Known RBP	12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	OFD1	O75665	1012 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	CTDNEP1	O95476	244 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	GALT	P07902	379 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	HOXA11	P31270	313 aa	Predicted RBP	12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	YWHAB	P31946	246 aa	Known RBP	12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	SIGLEC14	Q08ET2	396 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	ANKRD1	Q15327	319 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	PTPN21	Q16825	1174 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	PIK3AP1	Q6ZUJ8	805 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	OTUD6A	Q7L8S5	288 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	TMEM173	Q86WV6	379 aa	Predicted RBP	12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	SLFN12	Q8IYM2	578 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	VPS52	Q8N1B4	723 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	ZNF579	Q8NAF0	562 aa	Known RBP	12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	OXER1	Q8TDS5	423 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	PSPC1	Q8WXF1	523 aa	Known RBP	12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	WASF1	Q92558	559 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	TNFRSF25	Q93038	417 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	PGBD4	Q96DM1	585 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	CEP170P1	Q96L14	293 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	NLRP4	Q96MN2	994 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	LXN	Q9BS40	222 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	ZSWIM4	Q9H7M6	989 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	NRDE2	Q9H7Z3	1164 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	GJB4	Q9NTQ9	266 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	PCDHB2	Q9Y5E7	798 aa		12.45	□□□□□ -0.42
CBWD1-222	ENST00000613508	CNTNAP2	Q9UHC6	1331 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	MEIS3P2	A8K0S8	358 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	ASAP2	O43150	1006 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	CCNT1	O60563	726 aa	Known RBP	12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	CXCL14	O95715	111 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	CTSA	P10619	480 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	POU5F1B	Q06416	359 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	LAMTOR4	Q0VGL1	99 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	CES5A	Q6NT32	575 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	LLGL2	Q6P1M3	1020 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	AGMO	Q6ZNB7	445 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	FBXL6	Q8N531	539 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	TCP11	Q8WWU5	503 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	LPP	Q93052	612 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	PBXIP1	Q96AQ6	731 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	PRRX2	Q99811	253 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	MINDY3	Q9H8M7	445 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	DZANK1	Q9NVP4	752 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	KANSL3	Q9P2N6	904 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	NR2E1	Q9Y466	385 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	ZDBF2	Q9HCK1	2354 aa		12.44	□□□□□ -0.42
CBWD1-222	ENST00000613508	NT5C1B-RDH14	C9J2C7	533 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	INPPL1	O15357	1258 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	SLITRK3	O94933	977 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	LYPLA2	O95372	231 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	BAG4	O95429	457 aa	Known RBP	12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	FDPS	P14324	419 aa	Known RBP	12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	MTHFR	P42898	656 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	RNASEL	Q05823	741 aa	Known RBP	12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	MXD4	Q14582	209 aa	Predicted RBP	12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	EMC2	Q15006	297 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	EARS2	Q5JPH6	523 aa	Known RBP	12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	UBXN11	Q5T124	520 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	FERMT3	Q86UX7	667 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	URGCP	Q8TCY9	931 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	SLC22A17	Q8WUG5	538 aa		12.43	□□□□□ -0.42
CBWD1-222	ENST00000613508	BCL7C	Q8WUZ0	217 aa	Predicted RBP	12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms