RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 FAM205CA6NFA0 338 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 TPD52L2O43399 206 aaKnown RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PSEN1P49768 467 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 HHATQ5VTY9 493 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 DENND2CQ68D51 928 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 SYT2Q8N9I0 419 aaPredicted RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 POLR3FQ9H1D9 316 aaPredicted RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PPANQ9NQ55 473 aaKnown RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 DNAJC12Q9UKB3 198 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 MYO1FO00160 1098 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 MYBPC2Q14324 1141 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 RINT1Q6NUQ1 792 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PDCD7Q8N8D1 485 aaKnown RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PIGOQ8TEQ8 1089 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 ZBTB10Q96DT7 871 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 MOV10L1Q9BXT6 1211 aaKnown RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 IL17RBQ9NRM6 502 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 NHSL1Q5SYE7 1610 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PP2D1A8MPX8 630 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 ANKRD65E5RJM6 399 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 CASQ2O14958 399 aaPredicted RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 ASAP2O43150 1006 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 STAMBPO95630 424 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 GGPS1O95749 300 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 HOXC6P09630 235 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 ABCB4P21439 1286 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 CUL1Q13616 776 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PDE1CQ14123 709 aaPredicted RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 FBXW10Q5XX13 1052 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 KRT39Q6A163 491 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 LZICQ8WZA0 190 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 DPF2Q92785 391 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 ZNF653Q96CK0 615 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 FGD4Q96M96 766 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 GABBR1Q9UBS5 961 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 FOXN1O15353 648 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 VIL1P09327 827 aaKnown RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PLCB4Q15147 1175 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PCNX4Q63HM2 1172 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 CCDC117Q8IWD4 279 aaPredicted RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 CCDC89Q8N998 374 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 PSPC1Q8WXF1 523 aaKnown RBP9.35□□□□□ -0.91
PDE6A-204ENST00000613228 MIEF2Q96C03 454 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 SMC6Q96SB8 1091 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 KIAA1683Q9H0B3 1180 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
PDE6A-204ENST00000613228 MYMKA6NI61 221 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 PLA2G6O60733 806 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 MAPK6Q16659 721 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 CCDC144BQ3MJ40 725 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 TOGARAM2Q6ZUX3 1019 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 CCDC197Q8NCU1 140 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 PPP1R14CQ8TAE6 165 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 NLRP7Q8WX94 980 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 PCIF1Q9H4Z3 704 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 ADARB2Q9NS39 739 aaKnown RBP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 KBTBD4Q9NVX7 518 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 ITGB1BP2Q9UKP3 347 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 LRRC53A6NM62 1247 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 INO80B-WBP1J3KQ70 363 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 CALB1P05937 261 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 CYP3A4P08684 503 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 MAPK4P31152 587 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 COG7P83436 770 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 CDK17Q00537 523 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 TAP1Q03518 808 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 SFSWAPQ12872 951 aaKnown RBP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 MXD4Q14582 209 aaPredicted RBP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 APOBEC3HQ6NTF7 200 aaKnown RBP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 PPP1R21Q6ZMI0 780 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 PARK7Q99497 189 aaKnown RBP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 KCNQ5Q9NR82 932 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 FAM217BQ9NTX9 383 aaPredicted RBP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 TXNDC16Q9P2K2 825 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 STRIP2Q9ULQ0 834 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 A0A087WWV3 80 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 DAPK3O43293 454 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 COBLO75128 1261 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 RNF8O76064 485 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 KRT81Q14533 505 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 FAM43BQ6ZT52 329 aaPredicted RBP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 RASGRP2Q7LDG7 609 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 METTL23Q86XA0 190 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 ERGIC2Q96RQ1 377 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 STK38LQ9Y2H1 464 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 SKIP12755 728 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 HMGCS2P54868 508 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 FMR1Q06787 632 aaKnown RBP eCLIP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 GRB10Q13322 594 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 ALKBH5Q6P6C2 394 aaKnown RBP9.34□□□□□ -0.91
PDE6A-204ENST00000613228 TMEM60Q9H2L4 133 aa9.34□□□□□ -0.91
PDE6A-204ENST00000613228 HNRNPCP07910 306 aaKnown RBP eCLIP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 CETPP11597 493 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 SOX5P35711 763 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 GPC3P51654 580 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 FIGNQ5HY92 759 aa9.33□□□□□ -0.92
PDE6A-204ENST00000613228 ANGEL2Q5VTE6 544 aaKnown RBP9.33□□□□□ -0.92
PDE6A-204ENST00000613228 ALS2CLQ60I27 953 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms