RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TRAF5O00463 557 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 TUFMP49411 452 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PUS10Q3MIT2 529 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 HPS1Q92902 700 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 GINS4Q9BRT9 223 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 FANCEQ9HB96 536 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 FAM53CQ9NYF3 392 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ATP1A4Q13733 1029 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 CTTNQ14247 550 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 RHOT2Q8IXI1 618 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 CCDC82Q8N4S0 544 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 SYTL5Q8TDW5 730 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM45Q9H8W5 580 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM39Q9HCM9 518 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PREBQ9HCU5 417 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 CYP39A1Q9NYL5 469 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 IPPQ9Y573 584 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 LMTK2Q8IWU2 1503 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 A0A087WXM4 84 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 GNB5O14775 395 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 BCL10O95999 233 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 GNAQP50148 359 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 UNC13DQ70J99 1090 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ABHD10Q9NUJ1 306 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 STAP2Q9UGK3 403 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 POLR3AO14802 1390 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 KYNUQ16719 465 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PLEKHA7Q6IQ23 1121 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 LRRC74BQ6ZQY2 392 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ELOA2Q8IYF1 753 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MINDY2Q8NBR6 621 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 SLC10A4Q96EP9 437 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 VMP1Q96GC9 406 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PTTG2Q9NZH5 202 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 EXOC1LA0A1B0GW35 172 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PCP4L1A6NKN8 68 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 RASA4BC9J798 803 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 RASA4O43374 803 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MBD4O95243 580 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 TKTP29401 623 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 SV2BQ7L1I2 683 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 NME9Q86XW9 330 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MAGED4Q96JG8 741 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 MRPL11Q9Y3B7 192 aaKnown RBP5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PFDN6O15212 129 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 FKBP6O75344 327 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 PRLRP16471 622 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ZNF18P17022 549 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 NLRP6P59044 892 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 SPATA16Q9BXB7 569 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 ANKZF1Q9H8Y5 726 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 GPCPD1Q9NPB8 672 aa5.26□□□□□ -1.57
VPS13D-213ENST00000613099 NOP56O00567 594 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TSPAN1O60635 241 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ZBED1O96006 694 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ANXA13P27216 316 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 PTPN4P29074 926 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 GNL1P36915 607 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 KLHL12Q53G59 568 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 POP5Q969H6 163 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ZNF423Q2M1K9 1284 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TMTC4Q5T4D3 741 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CD302Q8IX05 232 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ATXN2LQ8WWM7 1075 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TESK2Q96S53 571 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SNX25Q9H3E2 840 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ANKARQ7Z5J8 1434 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 RGS20O76081 388 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM49P0CI25 452 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM49CP0CI26 452 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 IL10P22301 178 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SPICE1Q8N0Z3 855 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TSPYL6Q8N831 410 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 AGAP11Q8TF27 550 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 LRRC1Q9BTT6 524 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 FOXP3Q9BZS1 431 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SAR1AQ9NR31 198 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 PANK4Q9NVE7 773 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SERPINB2P05120 415 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 SERPING1P05155 500 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CYP11B2P19099 503 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ALDH5A1P51649 535 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 RGS9BPQ6ZS82 235 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 AKAP14Q86UN6 197 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 NOA1Q8NC60 698 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CAPSLQ8WWF8 208 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 NAPBQ9H115 298 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 MBIPQ9NS73 344 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 RGPD1P0DJD0 1748 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 PPP6R2O75170 966 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 TRMUO75648 421 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 MFN2O95140 757 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 HIC1Q14526 733 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 ZCCHC7Q8N3Z6 543 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 STX19Q8N4C7 294 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 PSMA4P25789 261 aaKnown RBP5.25□□□□□ -1.57
VPS13D-213ENST00000613099 CLCN2P51788 898 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 RCAN1P53805 252 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 REXO1L1PQ8IX06 675 aa5.25□□□□□ -1.57
VPS13D-213ENST00000613099 OSBPL6Q9BZF3 934 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms