RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 CASZ1Q86V15 1759 aa9.45□□□□□ -0.9
LINC00547-201ENST00000612438 UTRNP46939 3433 aa9.45□□□□□ -0.9
LINC00547-201ENST00000612438 MYH1P12882 1939 aa9.45□□□□□ -0.9
LINC00547-201ENST00000612438 HTR3EA5X5Y0 456 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 NAT2P11245 290 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 FXR2P51116 673 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 TNNC1P63316 161 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 LRRC41Q15345 812 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 SLC18A3Q16572 532 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 LRIG3Q6UXM1 1119 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 TRIM50Q86XT4 487 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 ZNF444Q8N0Y2 327 aaPredicted RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 GLIS3Q8NEA6 775 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 SREK1Q8WXA9 508 aaKnown RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 RAD54LQ92698 747 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 CELF1Q92879 486 aaKnown RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 SMC6Q96SB8 1091 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 MIS12Q9H081 205 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 ISCUQ9H1K1 167 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 NRDE2Q9H7Z3 1164 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 TFCP2L1Q9NZI6 479 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 EFR3BQ9Y2G0 817 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 COL4A3BPQ9Y5P4 624 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 PHLPP1O60346 1717 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 SCN7AQ01118 1682 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 CES2O00748 559 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 LDHAP00338 332 aaKnown RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 HOXD11P31277 338 aaPredicted RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 CD97P48960 835 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 RNASE9P60153 205 aaKnown RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 FKBP3Q00688 224 aaKnown RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 ZCWPW2Q504Y3 356 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 GRAMD4Q6IC98 578 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 PACS1Q6VY07 963 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 ABTB1Q969K4 478 aaPredicted RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 CDK5RAP3Q96JB5 506 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 PACSIN2Q9UNF0 486 aaPredicted RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 STX8Q9UNK0 236 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 COMMD3-BMI1R4GMX3 469 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 A0A087X0T9 212 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 FAM228BP0C875 321 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 POLR2FP61218 127 aaKnown RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 CALCRLQ16602 461 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 CLIP3Q96DZ5 547 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 SNX27Q96L92 541 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 IFT74Q96LB3 600 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 SH3GL1Q99961 368 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 LSM14BQ9BX40 385 aaKnown RBP9.44□□□□□ -0.9
LINC00547-201ENST00000612438 PPP1R12CQ9BZL4 782 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 LRRC27Q9C0I9 530 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 ADAM22Q9P0K1 906 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 LNPEPQ9UIQ6 1025 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 LAMB2P55268 1798 aa9.44□□□□□ -0.9
LINC00547-201ENST00000612438 ROBO3Q96MS0 1386 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 DYTNA2CJ06 578 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 H0YGN5 161 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 WFS1O76024 890 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 MYCLP1P12525 358 aaPredicted RBP9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ECHS1P30084 290 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 SERPINB4P48594 390 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 KCNJ2P63252 427 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 GSTM4Q03013 218 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ITGA7Q13683 1181 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 MAP7Q14244 749 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ITIH4Q14624 930 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 INAQ16352 499 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 FAM133BQ5BKY9 247 aaKnown RBP9.43□□□□□ -0.9
LINC00547-201ENST00000612438 FOXB2Q5VYV0 432 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 KLHL7Q8IXQ5 586 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
LINC00547-201ENST00000612438 DEPTORQ8TB45 409 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 NCSTNQ92542 709 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 EIF2AQ9BY44 585 aaKnown RBP9.43□□□□□ -0.9
LINC00547-201ENST00000612438 AIPL1Q9NZN9 384 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ZNF180Q9UJW8 692 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 NFS1Q9Y697 457 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ABCA3Q99758 1704 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 BHMG1C9JSJ3 638 aaPredicted RBP9.43□□□□□ -0.9
LINC00547-201ENST00000612438 TRAF5O00463 557 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 TOM1O60784 492 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 HSD17B3P37058 310 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 MSH2P43246 934 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 USP11P51784 963 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 MTTPP55157 894 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ERVK-9P63128 1117 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 LSAMPQ13449 338 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ITPK1Q13572 414 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 SLC44A5Q8NCS7 719 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 STKLD1Q8NE28 680 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 SCFD2Q8WU76 684 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ATP6V0A1Q93050 837 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 CATSPER2Q96P56 530 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 PACSIN1Q9BY11 444 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 TMEM260Q9NX78 707 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 PDP2Q9P2J9 529 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ADAMTS1Q9UHI8 967 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 ZNF652Q9Y2D9 606 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 BTNL10A8MVZ5 291 aa9.43□□□□□ -0.9
LINC00547-201ENST00000612438 GCOM1H8Y6P7 765 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms