RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 RUSC1Q9BVN2 902 aa28.83■■■□□ 2.21
VEGFA-226ENST00000611736 FBXO2Q9UK22 296 aaPredicted RBP28.83■■■□□ 2.21
VEGFA-226ENST00000611736 MRPL42Q9Y6G3 142 aaKnown RBP28.83■■■□□ 2.21
VEGFA-226ENST00000611736 PDIA4P13667 645 aaKnown RBP28.82■■■□□ 2.2
VEGFA-226ENST00000611736 CTNNB1P35222 781 aa28.82■■■□□ 2.2
VEGFA-226ENST00000611736 FOXD4L6Q3SYB3 417 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-226ENST00000611736 FOXD4L3Q6VB84 417 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-226ENST00000611736 RASSF8Q8NHQ8 419 aa28.82■■■□□ 2.2
VEGFA-226ENST00000611736 CALML4Q96GE6 196 aa28.82■■■□□ 2.2
VEGFA-226ENST00000611736 CSRNP2Q9H175 543 aa28.82■■■□□ 2.2
VEGFA-226ENST00000611736 RALGAPA2Q2PPJ7 1873 aa28.82■■■□□ 2.2
VEGFA-226ENST00000611736 HOXA11P31270 313 aaPredicted RBP28.81■■■□□ 2.2
VEGFA-226ENST00000611736 SPECC1Q5M775 1068 aa28.81■■■□□ 2.2
VEGFA-226ENST00000611736 MICALL1Q8N3F8 863 aa28.81■■■□□ 2.2
VEGFA-226ENST00000611736 CLIC6Q96NY7 704 aa28.81■■■□□ 2.2
VEGFA-226ENST00000611736 NFKBIZQ9BYH8 718 aa28.81■■■□□ 2.2
VEGFA-226ENST00000611736 RNF19AQ9NV58 838 aa28.81■■■□□ 2.2
VEGFA-226ENST00000611736 SRPRBQ9Y5M8 271 aaKnown RBP28.81■■■□□ 2.2
VEGFA-226ENST00000611736 REV3LO60673 3130 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 SLC26A4O43511 780 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 GTPBP6O43824 516 aaPredicted RBP28.8■■■□□ 2.2
VEGFA-226ENST00000611736 TSPAN1O60635 241 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 LPXNO60711 386 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 F13A1P00488 732 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 LINC00271P0C7V0 271 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 ATF7P17544 494 aaPredicted RBP28.8■■■□□ 2.2
VEGFA-226ENST00000611736 KARSQ15046 597 aaKnown RBP28.8■■■□□ 2.2
VEGFA-226ENST00000611736 RINT1Q6NUQ1 792 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 ZBTB8OSQ8IWT0 167 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 PPM1EQ8WY54 764 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 KIFAP3Q92845 792 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 CLP1Q92989 425 aaKnown RBP28.8■■■□□ 2.2
VEGFA-226ENST00000611736 IFT74Q96LB3 600 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 ZNF396Q96N95 335 aaPredicted RBP28.8■■■□□ 2.2
VEGFA-226ENST00000611736 FAM105AQ9NUU6 356 aa28.8■■■□□ 2.2
VEGFA-226ENST00000611736 TFIP11Q9UBB9 837 aaKnown RBP28.8■■■□□ 2.2
VEGFA-226ENST00000611736 KIAA1671Q9BY89 1806 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 HOXA2O43364 376 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 PLA2G4BP0C869 781 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 NASPP49321 788 aaPredicted RBP28.79■■■□□ 2.2
VEGFA-226ENST00000611736 SLC39A14Q15043 492 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 STK38Q15208 465 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 PCBP1Q15365 356 aaKnown RBP eCLIP28.79■■■□□ 2.24e-7■■□□□ 11.7
VEGFA-226ENST00000611736 LONRF3Q496Y0 759 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 CDCA2Q69YH5 1023 aaPredicted RBP28.79■■■□□ 2.2
VEGFA-226ENST00000611736 C1orf186Q6ZWK4 172 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 ZNF598Q86UK7 904 aaKnown RBP28.79■■■□□ 2.2
VEGFA-226ENST00000611736 KCTD17Q8N5Z5 321 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 CPB2Q96IY4 423 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 EPSTI1Q96J88 318 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 TRAIPQ9BWF2 469 aa28.79■■■□□ 2.2
VEGFA-226ENST00000611736 HIP1RO75146 1068 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 EOMESO95936 686 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 SKIP12755 728 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 PLCG1P19174 1290 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 NAMPTP43490 491 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 NCBP1Q09161 790 aaKnown RBP28.78■■■□□ 2.2
VEGFA-226ENST00000611736 PPP2R5AQ15172 486 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 CCDC85BQ15834 202 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-226ENST00000611736 AMHR2Q16671 573 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 USP49Q70CQ1 688 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 ABI1Q8IZP0 508 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 SYT2Q8N9I0 419 aaPredicted RBP28.78■■■□□ 2.2
VEGFA-226ENST00000611736 DEPTORQ8TB45 409 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 LPPQ93052 612 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 KIFC3Q9BVG8 833 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 TMEM117Q9H0C3 514 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 RWDD3Q9Y3V2 267 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 MTCH2Q9Y6C9 303 aa28.78■■■□□ 2.2
VEGFA-226ENST00000611736 MYO7AQ13402 2215 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 B4GALT5O43286 388 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 BMPR1AP36894 532 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 RAB27AP51159 221 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 SLC12A3P55017 1021 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 RAD51AP2Q09MP3 1159 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 GPM6BQ13491 265 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 BECN1Q14457 450 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 CLLU1OSQ5K130 101 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 SPOUT1Q5T280 376 aaKnown RBP28.77■■■□□ 2.2
VEGFA-226ENST00000611736 LRRC15Q8TF66 581 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 SYMPKQ92797 1274 aaKnown RBP28.77■■■□□ 2.2
VEGFA-226ENST00000611736 CASD1Q96PB1 797 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 C2orf40Q9H1Z8 148 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 HCSTQ9UBK5 93 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 PCDHB2Q9Y5E7 798 aa28.77■■■□□ 2.2
VEGFA-226ENST00000611736 ARF4P18085 180 aaPredicted RBP28.76■■■□□ 2.19
VEGFA-226ENST00000611736 LIG1P18858 919 aa28.76■■■□□ 2.19
VEGFA-226ENST00000611736 AXLP30530 894 aa28.76■■■□□ 2.19
VEGFA-226ENST00000611736 UBXN11Q5T124 520 aa28.76■■■□□ 2.19
VEGFA-226ENST00000611736 NOTUMQ6P988 496 aa28.76■■■□□ 2.19
VEGFA-226ENST00000611736 DAW1Q8N136 415 aa28.76■■■□□ 2.19
VEGFA-226ENST00000611736 KRI1Q8N9T8 703 aaKnown RBP28.76■■■□□ 2.19
VEGFA-226ENST00000611736 LINC00301Q8NCQ3 95 aa28.76■■■□□ 2.19
VEGFA-226ENST00000611736 HELQQ8TDG4 1101 aa28.76■■■□□ 2.19
VEGFA-226ENST00000611736 CCSER1Q9C0I3 900 aa28.76■■■□□ 2.19
VEGFA-226ENST00000611736 DAXXQ9UER7 740 aaPredicted RBP28.76■■■□□ 2.19
VEGFA-226ENST00000611736 MORC2Q9Y6X9 1032 aaPredicted RBP28.76■■■□□ 2.19
VEGFA-226ENST00000611736 H3BNC9 293 aa28.75■■■□□ 2.19
VEGFA-226ENST00000611736 POU3F3P20264 500 aaPredicted RBP28.75■■■□□ 2.19
VEGFA-226ENST00000611736 DHX8Q14562 1220 aaKnown RBP28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms