RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 SALL1Q9NSC2 1324 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PPLO60437 1756 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 hCG_1984214I3L0E3 225 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 EIF3HO15372 352 aaKnown RBP eCLIP4.07□□□□□ -1.76
RNF38-210ENST00000611646 SMIM24O75264 130 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 STK10O94804 968 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 MT-ND3P03897 115 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 BRAFP15056 766 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PSMA2P25787 234 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 MDH1P40925 334 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 PPM1FP49593 454 aaPredicted RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 GABPAQ06546 454 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 COG2Q14746 738 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SH2D4BQ5SQS7 431 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 C6orf118Q5T5N4 469 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 RCSD1Q6JBY9 416 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 INTS5Q6P9B9 1019 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 TRAPPC11Q7Z392 1133 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 CATSPER3Q86XQ3 398 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PROM2Q8N271 834 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ZNF713Q8N859 430 aaPredicted RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 XXYLT1Q8NBI6 393 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 GSDMBQ8TAX9 411 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PYROXD1Q8WU10 500 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ATXN7L3BQ96GX2 97 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 RUNDC3BQ96NL0 473 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 GBP5Q96PP8 586 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 NUDT12Q9BQG2 462 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ECT2Q9H8V3 914 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 GABBR1Q9UBS5 961 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 IVNS1ABPQ9Y6Y0 642 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 BAZ2BQ9UIF8 2168 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 KIF20BQ96Q89 1820 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 K7ERI5 159 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 CFLARO15519 480 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PPP1R37O75864 691 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 GLI1P08151 1106 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 FAM153BP0C7A2 387 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 NCF2P19878 526 aaPredicted RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 LSP1P33241 339 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 KCNJ6P48051 423 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ZNF543Q08ER8 600 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 GPS1Q13098 491 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SLMAPQ14BN4 828 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SEC23AQ15436 765 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PPP2R5EQ16537 467 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 FAM153CQ494X1 144 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 GLE1Q53GS7 698 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 NAALADL2Q58DX5 795 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 FAM47CQ5HY64 1035 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 LGSNQ5TDP6 509 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 RAPH1Q70E73 1250 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 EPM2AIP1Q7L775 607 aaPredicted RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 ZC3H18Q86VM9 953 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 C4orf33Q8N1A6 199 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ATP6V0A1Q93050 837 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 IL17RAQ96F46 866 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 RUSC1Q9BVN2 902 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SMYD3Q9H7B4 428 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 OSGEPQ9NPF4 335 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ARHGAP20Q9P2F6 1191 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 FAM153AQ9UHL3 310 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ANAPC4Q9UJX5 808 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 MROH1Q8NDA8 1641 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 TARSL2A2RTX5 802 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 MED24O75448 989 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 RCAN1P53805 252 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 POLE2P56282 527 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PSMC6P62333 389 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SARNPP82979 210 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 ADCY2Q08462 1091 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 NFIAQ12857 509 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 FOXD4Q12950 439 aaPredicted RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 CDC42EP5Q6NZY7 148 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 SPATA24Q86W54 205 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 CCDC33Q8N5R6 958 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 NKX2-3Q8TAU0 364 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PPP4R1Q8TF05 950 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 ATG4AQ8WYN0 398 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 AGPAT1Q99943 283 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 DDX23Q9BUQ8 820 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 SLC13A1Q9BZW2 595 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 YIPF3Q9GZM5 350 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 THAP2Q9H0W7 228 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 CNOT10Q9H9A5 744 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 IFT122Q9HBG6 1241 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 NGRNQ9NPE2 291 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 PFDN4Q9NQP4 134 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 IL17RBQ9NRM6 502 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 KLC4Q9NSK0 619 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 CPSF2Q9P2I0 782 aaKnown RBP4.07□□□□□ -1.76
RNF38-210ENST00000611646 USP20Q9Y2K6 914 aa4.07□□□□□ -1.76
RNF38-210ENST00000611646 PREX1Q8TCU6 1659 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 A6NJR5 290 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ZNF233A6NK53 670 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CCDC188H7C350 402 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 ZBTB39O15060 712 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 TRPA1O75762 1119 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 CPP00450 1065 aa4.06□□□□□ -1.76
RNF38-210ENST00000611646 FRMPD1Q5SYB0 1578 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms