RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 HELQQ8TDG4 1101 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 PIGOQ8TEQ8 1089 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 PPP2R3CQ969Q6 453 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 TBC1D32Q96NH3 1257 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 POLR3CQ9BUI4 534 aaPredicted RBP14.35□□□□□ -0.11
SNX20-205ENST00000610485 MRPL9Q9BYD2 267 aaKnown RBP14.35□□□□□ -0.11
SNX20-205ENST00000610485 CLDND1Q9NY35 253 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 DBR1Q9UK59 544 aaKnown RBP14.35□□□□□ -0.11
SNX20-205ENST00000610485 LZTS1Q9Y250 596 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 KIF3AQ9Y496 699 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 ARID2Q68CP9 1835 aa14.35□□□□□ -0.11
SNX20-205ENST00000610485 GRXCR2A6NFK2 248 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 RPA1P27694 616 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 HOXA11P31270 313 aaPredicted RBP14.34□□□□□ -0.11
SNX20-205ENST00000610485 GTF2F1P35269 517 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNX20-205ENST00000610485 PPM1AP35813 382 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 MCM2P49736 904 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 TOB1P50616 345 aaPredicted RBP14.34□□□□□ -0.11
SNX20-205ENST00000610485 PTENP60484 403 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 CAPSQ13938 189 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 NBR1Q14596 966 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 PCBP1Q15365 356 aaKnown RBP eCLIP14.34□□□□□ -0.11
SNX20-205ENST00000610485 PTCRAQ6ISU1 281 aaPredicted RBP14.34□□□□□ -0.11
SNX20-205ENST00000610485 ERMNQ8TAM6 284 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 ASAP3Q8TDY4 903 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 MRPS27Q92552 414 aaKnown RBP14.34□□□□□ -0.11
SNX20-205ENST00000610485 CCDC43Q96MW1 224 aaKnown RBP14.34□□□□□ -0.11
SNX20-205ENST00000610485 TLR9Q9NR96 1032 aa14.34□□□□□ -0.11
SNX20-205ENST00000610485 A0A087WWV3 80 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 FSCN2O14926 492 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 LINC01565O15544 149 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 TBX10O75333 385 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 IL9P15248 144 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 MUTP22033 750 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 GLRA2P23416 452 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 PBX3P40426 434 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNX20-205ENST00000610485 DLX2Q07687 328 aaPredicted RBP14.33□□□□□ -0.12
SNX20-205ENST00000610485 ADAM15Q13444 863 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 TFDP1Q14186 410 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 UBXN11Q5T124 520 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 PDE12Q6L8Q7 609 aaKnown RBP14.33□□□□□ -0.12
SNX20-205ENST00000610485 GLB1LQ6UWU2 654 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 EP400NLQ6ZTU2 488 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 MRPL10Q7Z7H8 261 aaKnown RBP14.33□□□□□ -0.12
SNX20-205ENST00000610485 EFHBQ8N7U6 833 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 LPPQ93052 612 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 PGBD4Q96DM1 585 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 NACC1Q96RE7 527 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 NFKBIZQ9BYH8 718 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 PCDHB2Q9Y5E7 798 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 PCDHGC5Q9Y5F6 944 aa14.33□□□□□ -0.12
SNX20-205ENST00000610485 PLXNA4Q9HCM2 1894 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 MEIS3P2A8K0S8 358 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 TSPAN1O60635 241 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 USO1O60763 962 aaKnown RBP14.32□□□□□ -0.12
SNX20-205ENST00000610485 OFD1O75665 1012 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 ERLIN2O94905 339 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 AXLP30530 894 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 NRIP1P48552 1158 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 ERVFC1P60507 584 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 MBTD1Q05BQ5 628 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 AMHR2Q16671 573 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 HAUS3Q68CZ6 603 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 AGMOQ6ZNB7 445 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 FAM178BQ8IXR5 827 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 SLC39A11Q8N1S5 342 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 MCPH1Q8NEM0 835 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 CCDC51Q96ER9 411 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 POLR3FQ9H1D9 316 aaPredicted RBP14.32□□□□□ -0.12
SNX20-205ENST00000610485 IGFLR1Q9H665 355 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 SPG21Q9NZD8 308 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 PUF60Q9UHX1 559 aaKnown RBP14.32□□□□□ -0.12
SNX20-205ENST00000610485 PCDHB6Q9Y5E3 794 aa14.32□□□□□ -0.12
SNX20-205ENST00000610485 TTC28Q96AY4 2481 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 NCLP19338 710 aaKnown RBP14.31□□□□□ -0.12
SNX20-205ENST00000610485 GJB2P29033 226 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 BCAR1P56945 870 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 KRT17Q04695 432 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 PTGDRQ13258 359 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 PDIA5Q14554 519 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 LONRF3Q496Y0 759 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 NOMO2Q5JPE7 1267 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 IGSF22Q8N9C0 903 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 MICAL1Q8TDZ2 1067 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 MSLNLQ96KJ4 702 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 CDCA3Q99618 268 aaPredicted RBP14.31□□□□□ -0.12
SNX20-205ENST00000610485 GPRC5CQ9NQ84 441 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.31□□□□□ -0.12
SNX20-205ENST00000610485 TBC1D13Q9NVG8 400 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 LRWD1Q9UFC0 647 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 FAM50BQ9Y247 325 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 CNTNAP2Q9UHC6 1331 aa14.31□□□□□ -0.12
SNX20-205ENST00000610485 FSD2A1L4K1 749 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 CARNS1A5YM72 827 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 INO80B-WBP1J3KQ70 363 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 LAD1O00515 517 aa14.3□□□□□ -0.12
SNX20-205ENST00000610485 GLP2RO95838 553 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms