RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 TMEM119Q4V9L6 283 aa14.15□□□□□ -0.14
CD9-212ENST00000610354 UBXN11Q5T124 520 aa14.15□□□□□ -0.14
CD9-212ENST00000610354 USP49Q70CQ1 688 aa14.15□□□□□ -0.14
CD9-212ENST00000610354 CMTR2Q8IYT2 770 aaKnown RBP14.15□□□□□ -0.14
CD9-212ENST00000610354 CLP1Q92989 425 aaKnown RBP14.15□□□□□ -0.14
CD9-212ENST00000610354 CCDC43Q96MW1 224 aaKnown RBP14.15□□□□□ -0.14
CD9-212ENST00000610354 CHST12Q9NRB3 414 aa14.15□□□□□ -0.14
CD9-212ENST00000610354 AGPAT5Q9NUQ2 364 aa14.15□□□□□ -0.14
CD9-212ENST00000610354 LRFN2Q9ULH4 789 aa14.15□□□□□ -0.14
CD9-212ENST00000610354 PIN4Q9Y237 131 aaKnown RBP14.15□□□□□ -0.14
CD9-212ENST00000610354 PRUNE2Q8WUY3 3088 aa14.15□□□□□ -0.14
CD9-212ENST00000610354 MEIS3P2A8K0S8 358 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 MARCKSP29966 332 aaPredicted RBP14.15□□□□□ -0.15
CD9-212ENST00000610354 PHKA2P46019 1235 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 CEBPZQ03701 1054 aaKnown RBP14.15□□□□□ -0.15
CD9-212ENST00000610354 CLLU1OSQ5K130 101 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 FOXD4L5Q5VV16 416 aaPredicted RBP14.15□□□□□ -0.15
CD9-212ENST00000610354 LRRC55Q6ZSA7 311 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 CABP7Q86V35 215 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 DAW1Q8N136 415 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 MCPH1Q8NEM0 835 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 FBXO22Q8NEZ5 403 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 FOXD4L4Q8WXT5 416 aaPredicted RBP14.15□□□□□ -0.15
CD9-212ENST00000610354 CASD1Q96PB1 797 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 RUSC1Q9BVN2 902 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 TRAIPQ9BWF2 469 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 FBXO2Q9UK22 296 aaPredicted RBP14.15□□□□□ -0.15
CD9-212ENST00000610354 DNM3Q9UQ16 869 aa14.15□□□□□ -0.15
CD9-212ENST00000610354 MYH11P35749 1972 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 TTLL13PA6NNM8 815 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 TBKBP1A7MCY6 615 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 C5orf67F2Z3F1 127 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 B4GALT5O43286 388 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 TSPAN1O60635 241 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 BMP15O95972 392 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 EDN1P05305 212 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 BMPR1AP36894 532 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 MAPK7Q13164 816 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 TFDP1Q14186 410 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 ZRSR1Q15695 479 aaKnown RBP14.14□□□□□ -0.15
CD9-212ENST00000610354 CCDC85BQ15834 202 aaPredicted RBP14.14□□□□□ -0.15
CD9-212ENST00000610354 SPECC1Q5M775 1068 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 RINT1Q6NUQ1 792 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 C1orf186Q6ZWK4 172 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 PPM1EQ8WY54 764 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 LPPQ93052 612 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 AK8Q96MA6 479 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 SAMD11Q96NU1 681 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 CLIC6Q96NY7 704 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 NFKBIZQ9BYH8 718 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 CSRNP2Q9H175 543 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 ZSCAN16Q9H4T2 348 aaPredicted RBP14.14□□□□□ -0.15
CD9-212ENST00000610354 CWH43Q9H720 699 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 PRDM6Q9NQX0 595 aa14.14□□□□□ -0.15
CD9-212ENST00000610354 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 H3BNC9 293 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 INO80B-WBP1J3KQ70 363 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 ZNF623O75123 536 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 CTNNB1P35222 781 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 LONP1P36776 959 aaKnown RBP14.13□□□□□ -0.15
CD9-212ENST00000610354 SLC12A3P55017 1021 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 GPM6BQ13491 265 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 LONRF3Q496Y0 759 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 CDCA2Q69YH5 1023 aaPredicted RBP14.13□□□□□ -0.15
CD9-212ENST00000610354 TWF2Q6IBS0 349 aaKnown RBP14.13□□□□□ -0.15
CD9-212ENST00000610354 CPB2Q96IY4 423 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 EPSTI1Q96J88 318 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 BLOC1S4Q9NUP1 217 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 FAM105AQ9NUU6 356 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 TYW1Q9NV66 732 aaKnown RBP14.13□□□□□ -0.15
CD9-212ENST00000610354 DACT1Q9NYF0 836 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 TFIP11Q9UBB9 837 aaKnown RBP14.13□□□□□ -0.15
CD9-212ENST00000610354 USP20Q9Y2K6 914 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
CD9-212ENST00000610354 SRPRBQ9Y5M8 271 aaKnown RBP14.13□□□□□ -0.15
CD9-212ENST00000610354 LRRIQ4A6NIV6 560 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 GRM6O15303 877 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 HIP1RO75146 1068 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 EOMESO95936 686 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 ZSCAN22P10073 491 aaPredicted RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 ARF4P18085 180 aaPredicted RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 NASPP49321 788 aaPredicted RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 KARSQ15046 597 aaKnown RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 ARSHQ5FYA8 562 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 MRPL10Q7Z7H8 261 aaKnown RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 SYT2Q8N9I0 419 aaPredicted RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 RNF169Q8NCN4 708 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 SMG8Q8ND04 991 aaKnown RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 HELQQ8TDG4 1101 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 KIFC3Q9BVG8 833 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 EIF2AQ9BY44 585 aaKnown RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 TMEM117Q9H0C3 514 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 CCDC113Q9H0I3 377 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 FZD8Q9H461 694 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 ZDHHC9Q9Y397 364 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 MORC2Q9Y6X9 1032 aaPredicted RBP14.12□□□□□ -0.15
CD9-212ENST00000610354 BRWD1Q9NSI6 2320 aa14.12□□□□□ -0.15
CD9-212ENST00000610354 NPHP3-ACAD11A0A0J9YXS1 232 aa14.11□□□□□ -0.15
CD9-212ENST00000610354 SLC26A4O43511 780 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms