RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ALG3Q92685 438 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 ART4Q93070 314 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 ARHGEF26Q96DR7 871 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 PRMT1Q99873 361 aaKnown RBP24.12■■□□□ 1.45
SHANK2-220ENST00000608988 ZSWIM1Q9BR11 485 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 WNT8AQ9H1J5 351 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 SERPINB13Q9UIV8 391 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 RABGAP1Q9Y3P9 1069 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 USP15Q9Y4E8 981 aaPredicted RBP24.12■■□□□ 1.45
SHANK2-220ENST00000608988 PCDHA1Q9Y5I3 950 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 ALG6Q9Y672 507 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 ZMYM2Q9UBW7 1377 aa24.12■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L15C9J2P7 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L13C9JLJ4 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L11C9JVI0 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L18D6R9N7 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L22D6RA61 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L17D6RBQ6 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L19D6RCP7 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L20D6RJB6 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 NQO1P15559 274 aaKnown RBP24.11■■□□□ 1.45
SHANK2-220ENST00000608988 RPL21P46778 160 aaKnown RBP24.11■■□□□ 1.45
SHANK2-220ENST00000608988 IFI35P80217 286 aaPredicted RBP24.11■■□□□ 1.45
SHANK2-220ENST00000608988 GPSM2P81274 684 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L24Q0WX57 530 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 MYBPC2Q14324 1141 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 NFIXQ14938 502 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 USP17L6PQ6QN14 398 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 THAP2Q9H0W7 228 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 DAGLAQ9Y4D2 1042 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 SPATA31A5Q5VU36 1347 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 SPATA31A7Q8IWB4 1347 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 SUN1O94901 812 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 ABCB4P21439 1286 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 AUHQ13825 339 aaKnown RBP24.11■■□□□ 1.45
SHANK2-220ENST00000608988 GALNTL6Q49A17 601 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 C12orf50Q8NA57 414 aaPredicted RBP24.11■■□□□ 1.45
SHANK2-220ENST00000608988 IFT74Q96LB3 600 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 CCDC17Q96LX7 622 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 AGPAT1Q99943 283 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 DMAC2Q9NW81 257 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 GGA1Q9UJY5 639 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 FRMD4BQ9Y2L6 1034 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 RTCBQ9Y3I0 505 aaKnown RBP24.11■■□□□ 1.45
SHANK2-220ENST00000608988 PASKQ96RG2 1323 aa24.11■■□□□ 1.45
SHANK2-220ENST00000608988 CLIC2O15247 247 aa24.1■■□□□ 1.45
SHANK2-220ENST00000608988 UFL1O94874 794 aa24.1■■□□□ 1.45
SHANK2-220ENST00000608988 FAM13AO94988 1023 aa24.1■■□□□ 1.45
SHANK2-220ENST00000608988 SREBF1P36956 1147 aa24.1■■□□□ 1.45
SHANK2-220ENST00000608988 EIF6P56537 245 aaKnown RBP24.1■■□□□ 1.45
SHANK2-220ENST00000608988 MKRN3Q13064 507 aaKnown RBP24.1■■□□□ 1.45
SHANK2-220ENST00000608988 PRR16Q569H4 304 aa24.1■■□□□ 1.45
SHANK2-220ENST00000608988 SERPINB12Q96P63 405 aa24.1■■□□□ 1.45
SHANK2-220ENST00000608988 SEMA4AQ9H3S1 761 aa24.1■■□□□ 1.45
SHANK2-220ENST00000608988 MEIS1O00470 390 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 MEIS2O14770 477 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 KCNQ2O43526 872 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 BCRP11274 1271 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 SLC16A2P36021 539 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 ZNF211Q13398 564 aaPredicted RBP24.09■■□□□ 1.45
SHANK2-220ENST00000608988 CTTNQ14247 550 aaKnown RBP24.09■■□□□ 1.45
SHANK2-220ENST00000608988 HS2ST1Q7LGA3 356 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 LENG9Q96B70 501 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 RUSC1Q9BVN2 902 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 BHMT2Q9H2M3 363 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 TUFT1Q9NNX1 390 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 VAV3Q9UKW4 847 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 COG5Q9UP83 839 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 MUTP22033 750 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 SHMT1P34896 483 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 MYL7Q01449 175 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 ZNF568Q3ZCX4 644 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 SLC9A9Q8IVB4 645 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 SLCO2A1Q92959 643 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 C18orf8Q96DM3 657 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 NOP53Q9NZM5 478 aaKnown RBP24.09■■□□□ 1.45
SHANK2-220ENST00000608988 C15orf41Q9Y2V0 281 aa24.09■■□□□ 1.45
SHANK2-220ENST00000608988 QSER1Q2KHR3 1735 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 RSPH10B2B2RC85 870 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 RSPH10BP0C881 870 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 CCND1P24385 295 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 GPC5P78333 572 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 PPARDQ03181 441 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 RINT1Q6NUQ1 792 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 CCDC137Q6PK04 289 aaKnown RBP24.08■■□□□ 1.45
SHANK2-220ENST00000608988 KCTD1Q719H9 257 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 TBC1D16Q8TBP0 767 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 TCP11Q8WWU5 503 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 MKL1Q969V6 931 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 L3MBTL3Q96JM7 780 aaPredicted RBP24.08■■□□□ 1.45
SHANK2-220ENST00000608988 ANKRD27Q96NW4 1050 aa24.08■■□□□ 1.45
SHANK2-220ENST00000608988 TOM1O60784 492 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 CLTAP09496 248 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 COILP38432 576 aaPredicted RBP24.07■■□□□ 1.44
SHANK2-220ENST00000608988 PEX5P50542 639 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 NCALDP61601 193 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 CCDC24Q8N4L8 307 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 EPS8L3Q8TE67 593 aaKnown RBP24.07■■□□□ 1.44
SHANK2-220ENST00000608988 KCND2Q9NZV8 630 aa24.07■■□□□ 1.44
SHANK2-220ENST00000608988 WHRNQ9P202 907 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms