RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 IGSF22Q8N9C0 903 aa16.08■□□□□ 0.16
HDDC2-204ENST00000608295 MRPL38Q96DV4 380 aaKnown RBP16.08■□□□□ 0.16
HDDC2-204ENST00000608295 CASD1Q96PB1 797 aa16.08■□□□□ 0.16
HDDC2-204ENST00000608295 FAM105AQ9NUU6 356 aa16.08■□□□□ 0.16
HDDC2-204ENST00000608295 RWDD3Q9Y3V2 267 aa16.08■□□□□ 0.16
HDDC2-204ENST00000608295 A0A0U1RQF3 1178 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 DLL1O00548 723 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 TSPAN1O60635 241 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 SYT1P21579 422 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 DNAJB1P25685 340 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 ARL2P36404 184 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 CDC42EP1Q00587 391 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 GRIN1Q05586 938 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 MBTD1Q05BQ5 628 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 RAD51AP2Q09MP3 1159 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 MXD4Q14582 209 aaPredicted RBP16.07■□□□□ 0.16
HDDC2-204ENST00000608295 LRRC55Q6ZSA7 311 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 KCNK18Q7Z418 384 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 ZNF598Q86UK7 904 aaKnown RBP16.07■□□□□ 0.16
HDDC2-204ENST00000608295 HSCBQ8IWL3 235 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 LRRC43Q8N309 656 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 COLGALT1Q8NBJ5 622 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 IL27Q8NEV9 243 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 COL25A1Q9BXS0 654 aaPredicted RBP16.07■□□□□ 0.16
HDDC2-204ENST00000608295 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
HDDC2-204ENST00000608295 TMEM117Q9H0C3 514 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 ELAC1Q9H777 363 aaKnown RBP16.07■□□□□ 0.16
HDDC2-204ENST00000608295 DBR1Q9UK59 544 aaKnown RBP16.07■□□□□ 0.16
HDDC2-204ENST00000608295 USP20Q9Y2K6 914 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 MYH11P35749 1972 aa16.07■□□□□ 0.16
HDDC2-204ENST00000608295 C5orf67F2Z3F1 127 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 LAD1O00515 517 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 ASAP2O43150 1006 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 POU3F3P20264 500 aaPredicted RBP16.06■□□□□ 0.16
HDDC2-204ENST00000608295 IRS1P35568 1242 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 PTENP60484 403 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 FAM189BP81408 668 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 SF3A1Q15459 793 aaKnown RBP16.06■□□□□ 0.16
HDDC2-204ENST00000608295 TMEM132AQ24JP5 1023 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 TIGD5Q53EQ6 642 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 MCPH1Q8NEM0 835 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 POF1BQ8WVV4 589 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 MMTAG2Q9BU76 263 aaKnown RBP16.06■□□□□ 0.16
HDDC2-204ENST00000608295 IGFLR1Q9H665 355 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 CWH43Q9H720 699 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 PLAGL2Q9UPG8 496 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 HES2Q9Y543 173 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 PCDHB2Q9Y5E7 798 aa16.06■□□□□ 0.16
HDDC2-204ENST00000608295 NT5C1B-RDH14C9J2C7 533 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 HOXA2O43364 376 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 ZC3H11AO75152 810 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDDC2-204ENST00000608295 RB1P06400 928 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 HSP90AA1P07900 732 aaKnown RBP16.05■□□□□ 0.16
HDDC2-204ENST00000608295 PDCP20941 246 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 CA8P35219 290 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 GTF2F1P35269 517 aaKnown RBP eCLIP16.05■□□□□ 0.161e-9■■□□□ 14
HDDC2-204ENST00000608295 PRPHP41219 470 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
HDDC2-204ENST00000608295 RESTQ13127 1097 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 UBXN11Q5T124 520 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 ADGRD2Q7Z7M1 963 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 RASSF8Q8NHQ8 419 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 CDK5RAP3Q96JB5 506 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 NECAB3Q96P71 396 aaPredicted RBP16.05■□□□□ 0.16
HDDC2-204ENST00000608295 RUSC1Q9BVN2 902 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 NSUN3Q9H649 340 aaKnown RBP16.05■□□□□ 0.16
HDDC2-204ENST00000608295 CHST12Q9NRB3 414 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
HDDC2-204ENST00000608295 PCDHB12Q9Y5F1 795 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 CLIC4Q9Y696 253 aa16.05■□□□□ 0.16
HDDC2-204ENST00000608295 TDRD15B5MCY1 1934 aaKnown RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 FGF18O76093 207 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 NPTXRO95502 500 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 XRCC6P12956 609 aaKnown RBP eCLIP16.04■□□□□ 0.162e-8■□□□□ 10.1
HDDC2-204ENST00000608295 ARF4P18085 180 aaPredicted RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 LAG3P18627 525 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 CYP11B2P19099 503 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 KCNA5P22460 613 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 HOXA11P31270 313 aaPredicted RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 AFF1P51825 1210 aaKnown RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 RNASELQ05823 741 aaKnown RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 CAMK1Q14012 370 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 PDIA5Q14554 519 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 DHX8Q14562 1220 aaKnown RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 CLUL1Q15846 466 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 AMHR2Q16671 573 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 FOXD4L6Q3SYB3 417 aaPredicted RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 TJAP1Q5JTD0 557 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 FOXD4L3Q6VB84 417 aaPredicted RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 RBM23Q86U06 439 aaKnown RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 ZBTB8OSQ8IWT0 167 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 DEPTORQ8TB45 409 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 PNMA5Q96PV4 448 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 ASB2Q96Q27 587 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 PLVAPQ9BX97 442 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 NXF3Q9H4D5 531 aaKnown RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 UBE2ZQ9H832 354 aaPredicted RBP16.04■□□□□ 0.16
HDDC2-204ENST00000608295 LMCD1Q9NZU5 365 aa16.04■□□□□ 0.16
HDDC2-204ENST00000608295 MTMR6Q9Y217 621 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms