RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 DDIT3P35638 169 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 JAG1P78504 1218 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 ATF7IP2Q5U623 682 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 CHRDL2Q6WN34 429 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 HAUS6Q7Z4H7 955 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 PRPF31Q8WWY3 499 aaKnown RBP5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 CLIC6Q96NY7 704 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 MIS12Q9H081 205 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 RNPEPQ9H4A4 650 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 IGFLR1Q9H665 355 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 SLC39A2Q9NP94 309 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 EHD2Q9NZN4 543 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 ODF2LQ9ULJ1 636 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 ZDHHC9Q9Y397 364 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 CLIC4Q9Y696 253 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 TAF1LQ8IZX4 1826 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 A0A087WWV3 80 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 A0A087WZ62 844 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 ABHD14A-ACY1A0A1B0GW23 586 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 H7C4K7 107 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 HIP1RO75146 1068 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 NPTXRO95502 500 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 EIF4BP23588 611 aaKnown RBP5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 PIK3CAP42336 1068 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 MORN1Q5T089 497 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 SLC39A5Q6ZMH5 540 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 PDCL2Q8N4E4 241 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 KIF18AQ8NI77 898 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 IPO4Q8TEX9 1081 aaKnown RBP5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 FDXACB1Q9BRP7 624 aaPredicted RBP5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 TRPV6Q9H1D0 765 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 IL25Q9H293 177 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 RREB1Q92766 1687 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 LRG1P02750 347 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 ICAM3P32942 547 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 GPC3P51654 580 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 GOLGA8FQ08AF8 430 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 GOLGA8DPQ0D2H9 430 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 PAK1Q13153 545 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 ADAM9Q13443 819 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 SCN4BQ8IWT1 228 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 NEK11Q8NG66 645 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 CLSTN2Q9H4D0 955 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 PCIF1Q9H4Z3 704 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 TRMT1Q9NXH9 659 aaKnown RBP5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 NXF1Q9UBU9 619 aaKnown RBP5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 PAPPAQ13219 1627 aa5.61□□□□□ -1.51
SCARNA15-201ENST00000607520 CAPN9O14815 690 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 KLRC2P26717 231 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 CIITAP33076 1130 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 NDUFV1P49821 464 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 CRYBB1P53674 252 aaPredicted RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 SPA17Q15506 151 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 HSDL1Q3SXM5 330 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 ZNF667Q5HYK9 610 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 MAMDC4Q6UXC1 1216 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 ZNF771Q7L3S4 317 aaPredicted RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 SPDYE1Q8NFV5 336 aaPredicted RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 OR6B3Q8NGW1 331 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 CLEC4DQ8WXI8 215 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 ARNTL2Q8WYA1 636 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 RAD54LQ92698 747 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 CCDC51Q96ER9 411 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 DDX27Q96GQ7 796 aaKnown RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 AGO2Q9UKV8 859 aaKnown RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 ZNF831Q5JPB2 1677 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 SYNRGQ9UMZ2 1314 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 SMIM35A0A1B0GVV1 85 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 C2CD2LO14523 706 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 MEIS2O14770 477 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 CAND2O75155 1236 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 PFKFB1P16118 471 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 PTGS1P23219 599 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 PSMC2P35998 433 aaKnown RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 GPS2Q13227 327 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 PLCB4Q15147 1175 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 PCBP1Q15365 356 aaKnown RBP eCLIP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 COL13A1Q5TAT6 717 aaPredicted RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 CYP4A22Q5TCH4 519 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 TMC6Q7Z403 805 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 DCP1BQ8IZD4 617 aaKnown RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 AOPEPQ8N6M6 819 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 MLKLQ8NB16 471 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 TRAPPC12Q8WVT3 735 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 KCNB2Q92953 911 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 COL1A2P08123 1366 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 IGSF9BQ9UPX0 1349 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 B3GAT3O94766 335 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 RPN1P04843 607 aaKnown RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 THP07101 528 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 SLFN14P0C7P3 912 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 CYBAP13498 195 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 LAG3P18627 525 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 NAMPTP43490 491 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 ATP2C1P98194 919 aaPredicted RBP5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 TRIM32Q13049 653 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 RAPGEF1Q13905 1077 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 CNKSR3Q6P9H4 555 aa5.6□□□□□ -1.51
SCARNA15-201ENST00000607520 TTC39CQ8N584 583 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms