RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 FHDC1Q9C0D6 1143 aaPredicted RBP17.28■□□□□ 0.36
CTSA-214ENST00000606788 PLCB1Q9NQ66 1216 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 BTBD7Q9P203 1132 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 ANO9A1A5B4 782 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 HNRNPDLO14979 420 aaKnown RBP17.28■□□□□ 0.36
CTSA-214ENST00000606788 FOXR2Q6PJQ5 311 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 POMGNT1Q8WZA1 660 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
CTSA-214ENST00000606788 ERLIN1O75477 346 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 KCNA2P16389 499 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 KRT76Q01546 638 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 DMP1Q13316 513 aaPredicted RBP17.27■□□□□ 0.36
CTSA-214ENST00000606788 CASP8Q14790 479 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 XXYLT1Q8NBI6 393 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 DHX38Q92620 1227 aaKnown RBP17.27■□□□□ 0.36
CTSA-214ENST00000606788 ZNF408Q9H9D4 720 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 DMAC2Q9NW81 257 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 A0A0U1RQG5 324 aaPredicted RBP17.27■□□□□ 0.36
CTSA-214ENST00000606788 CNGA1P29973 690 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 SOX5P35711 763 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 PAFAH1B1P43034 410 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 GALCP54803 685 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 PRPF4BQ13523 1007 aaKnown RBP17.27■□□□□ 0.36
CTSA-214ENST00000606788 IFT81Q8WYA0 676 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 LUC7LQ9NQ29 371 aaKnown RBP17.27■□□□□ 0.36
CTSA-214ENST00000606788 SLC9A2Q9UBY0 812 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.36
CTSA-214ENST00000606788 CEP104O60308 925 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 TUBB2AQ13885 445 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 TRIM50Q86XT4 487 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 SYN2Q92777 582 aaPredicted RBP17.27■□□□□ 0.35
CTSA-214ENST00000606788 KRT12Q99456 494 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 FAM213AQ9BRX8 229 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 TUBB2BQ9BVA1 445 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 APEX2Q9UBZ4 518 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 ZNF112Q9UJU3 913 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 SNCAIPQ9Y6H5 919 aa17.27■□□□□ 0.35
CTSA-214ENST00000606788 KIF13BQ9NQT8 1826 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 PFASO15067 1338 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 PJA2O43164 708 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 TMEM63BQ5T3F8 832 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 DAAM2Q86T65 1068 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 SULF1Q8IWU6 871 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 C4orf19Q8IY42 314 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 NEK9Q8TD19 979 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 TBX20Q9UMR3 447 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 L1RE1Q9UN81 338 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 H2AFZP0C0S5 128 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 COPB2P35606 906 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 ACOT2P49753 483 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 JAK3P52333 1124 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 JAM2P57087 298 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 SNRNP35Q16560 246 aaKnown RBP17.26■□□□□ 0.35
CTSA-214ENST00000606788 C2CD6Q53TS8 623 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 H2AFVQ71UI9 128 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 ARHGEF26Q96DR7 871 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 ZBTB45Q96K62 511 aaPredicted RBP17.26■□□□□ 0.35
CTSA-214ENST00000606788 INPP4AQ96PE3 977 aaPredicted RBP17.26■□□□□ 0.35
CTSA-214ENST00000606788 VPS18Q9P253 973 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 RAB21Q9UL25 225 aa17.26■□□□□ 0.35
CTSA-214ENST00000606788 COL11A1P12107 1806 aaPredicted RBP17.25■□□□□ 0.35
CTSA-214ENST00000606788 LRRIQ4A6NIV6 560 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 LMNB1P20700 586 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 MXI1P50539 228 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 SUPT20HL1Q3ZLR7 823 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 EAPPQ56P03 285 aaPredicted RBP17.25■□□□□ 0.35
CTSA-214ENST00000606788 C1orf220Q5T0J3 134 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 ZNF662Q6ZS27 426 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 SMAP1Q8IYB5 467 aaPredicted RBP17.25■□□□□ 0.35
CTSA-214ENST00000606788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.25■□□□□ 0.352e-13■■□□□ 14
CTSA-214ENST00000606788 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 GPR88Q9GZN0 384 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 TMEM117Q9H0C3 514 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 POLR3FQ9H1D9 316 aaPredicted RBP17.25■□□□□ 0.35
CTSA-214ENST00000606788 ANKFY1Q9P2R3 1169 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 SSC5DA1L4H1 1573 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 BRCA2P51587 3418 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 TNFAIP3P21580 790 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 SMTNP53814 917 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 MKRN4PQ13434 485 aaPredicted RBP17.25■□□□□ 0.35
CTSA-214ENST00000606788 SKIDA1Q1XH10 827 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 VPS36Q86VN1 386 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 GPC2Q8N158 579 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 PPP1R16BQ96T49 567 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 XPNPEP1Q9NQW7 623 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 KCND2Q9NZV8 630 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 DBR1Q9UK59 544 aaKnown RBP17.25■□□□□ 0.35
CTSA-214ENST00000606788 CSADQ9Y600 493 aa17.25■□□□□ 0.35
CTSA-214ENST00000606788 POLGP54098 1239 aaPredicted RBP17.24■□□□□ 0.35
CTSA-214ENST00000606788 LY6KQ17RY6 165 aa17.24■□□□□ 0.35
CTSA-214ENST00000606788 HDXQ7Z353 690 aa17.24■□□□□ 0.35
CTSA-214ENST00000606788 DCPSQ96C86 337 aaKnown RBP17.24■□□□□ 0.35
CTSA-214ENST00000606788 STRA6Q9BX79 667 aa17.24■□□□□ 0.35
CTSA-214ENST00000606788 THAP2Q9H0W7 228 aa17.24■□□□□ 0.35
CTSA-214ENST00000606788 TMEM206Q9H813 350 aa17.24■□□□□ 0.35
CTSA-214ENST00000606788 HOXC10Q9NYD6 342 aa17.24■□□□□ 0.35
CTSA-214ENST00000606788 FAM53CQ9NYF3 392 aa17.24■□□□□ 0.35
CTSA-214ENST00000606788 CYP26A1O43174 497 aa17.24■□□□□ 0.35
CTSA-214ENST00000606788 TCP1P17987 556 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms