RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 IKZF4Q9H2S9 585 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 BATF3Q9NR55 127 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 NOP53Q9NZM5 478 aaKnown RBP16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 GGT7Q9UJ14 662 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 FRMPD4Q14CM0 1322 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 IGF2BP3O00425 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 GCNT3O95395 438 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 RARGP13631 454 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 TNFAIP3P21580 790 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 ZNF131P52739 623 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 GABPAQ06546 454 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 TAOK1Q7L7X3 1001 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 FAM186BQ8IYM0 893 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 RUSC1Q9BVN2 902 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 ANO3Q9BYT9 981 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 CCDC113Q9H0I3 377 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 SYNGAP1Q96PV0 1343 aa16.46■□□□□ 0.23
LYSMD4-211ENST00000604213 ANKRD63C9JTQ0 380 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 TTLL1O95922 423 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 MARCKSL1P49006 195 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 FMO5P49326 533 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 HADHBP55084 474 aaKnown RBP16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 KCNQ4P56696 695 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 BNIP1Q12981 228 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 NFIXQ14938 502 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 SLMAPQ14BN4 828 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 ERMNQ8TAM6 284 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 TCP11X1B4DZS4 312 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 KCNQ2O43526 872 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 PSMC2P35998 433 aaKnown RBP16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 TPTE2Q6XPS3 522 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 ART4Q93070 314 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 FAM163AQ96GL9 167 aaPredicted RBP16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 ZNF570Q96NI8 536 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 FGFR1OP2Q9NVK5 253 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 ZMYM2Q9UBW7 1377 aa16.45■□□□□ 0.22
LYSMD4-211ENST00000604213 MIF4GDA9UHW6 222 aaKnown RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 HSPA2P54652 639 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 COPS2P61201 443 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 LRRC14Q15048 493 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 ZNF568Q3ZCX4 644 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 C11orf63Q6NUN7 778 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 CCDC137Q6PK04 289 aaKnown RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 C15orf52Q6ZUT6 534 aaKnown RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 BZW1Q7L1Q6 419 aaKnown RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 PRCCQ92733 491 aaPredicted RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 ZSWIM1Q9BR11 485 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 ROPN1BQ9BZX4 212 aaPredicted RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 INTS2Q9H0H0 1204 aaKnown RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 ROPN1Q9HAT0 212 aaPredicted RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 HOMER3Q9NSC5 361 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 SEPT11Q9NVA2 429 aaKnown RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 TBCAO75347 108 aaKnown RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 SUN1O94901 812 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 KRT16P08779 473 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 CCND1P24385 295 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 POLD1P28340 1107 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 KIF22Q14807 665 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 PPP2R5AQ15172 486 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 CBWD6Q4V339 395 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 PRR16Q569H4 304 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 CBWD3Q5JTY5 395 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 CBWD5Q5RIA9 395 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 GPATCH4Q5T3I0 446 aaKnown RBP16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 MOXD1Q6UVY6 613 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 KCTD1Q719H9 257 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 RHOT2Q8IXI1 618 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 UBL4BQ8N7F7 174 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 CRYGNQ8WXF5 182 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 CD209Q9NNX6 404 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 ARHGEF3Q9NR81 526 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 NARFQ9UHQ1 456 aa16.44■□□□□ 0.22
LYSMD4-211ENST00000604213 GGPS1O95749 300 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 PEX5P50542 639 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 CTTNQ14247 550 aaKnown RBP16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 KIF2BQ8N4N8 673 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 GBP7Q8N8V2 638 aaPredicted RBP16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 MGARPQ8TDB4 240 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 ZNF622Q969S3 477 aaKnown RBP eCLIP16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 KLHL29Q96CT2 875 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 GLT8D2Q9H1C3 349 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 GAKO14976 1311 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 A8MUI8 341 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 PFASO15067 1338 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 DIAPH2O60879 1101 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 GJB6O95452 261 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 CREB1P16220 341 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 TCEAL1Q15170 157 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 NFIL3Q16649 462 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 CYP1B1Q16678 543 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 VSTM1Q6UX27 236 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 DYDC1Q8WWB3 177 aa16.43■□□□□ 0.22
LYSMD4-211ENST00000604213 RUNDC3BQ96NL0 473 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms