RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 NPTX2P47972 431 aa17.31■□□□□ 0.36
LINC00221-201ENST00000603633 ZNF131P52739 623 aa17.31■□□□□ 0.36
LINC00221-201ENST00000603633 WDR5P61964 334 aaKnown RBP17.31■□□□□ 0.36
LINC00221-201ENST00000603633 MAPK6Q16659 721 aa17.31■□□□□ 0.36
LINC00221-201ENST00000603633 LRIT3Q3SXY7 679 aa17.31■□□□□ 0.36
LINC00221-201ENST00000603633 TMEM87AQ8NBN3 555 aa17.31■□□□□ 0.36
LINC00221-201ENST00000603633 KMT5AQ9NQR1 393 aa17.31■□□□□ 0.36
LINC00221-201ENST00000603633 CXXC1Q9P0U4 656 aaPredicted RBP17.31■□□□□ 0.36
LINC00221-201ENST00000603633 PDE4DIPQ5VU43 2346 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 SFI1A8K8P3 1242 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 MYL1P05976 194 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 ATP2A2P16615 1042 aaKnown RBP17.3■□□□□ 0.36
LINC00221-201ENST00000603633 GAP43P17677 238 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 MBTD1Q05BQ5 628 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 FAM187BQ17R55 369 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 MYCT1Q8N699 235 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 BSNDQ8WZ55 320 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 TMX1Q9H3N1 280 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 TMEM134Q9H6X4 195 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 RGS18Q9NS28 235 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 AGPAT5Q9NUQ2 364 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 SEL1LQ9UBV2 794 aa17.3■□□□□ 0.36
LINC00221-201ENST00000603633 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 MYMKA6NI61 221 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 K7ERI5 159 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 CSDE1O75534 798 aaKnown RBP17.29■□□□□ 0.36
LINC00221-201ENST00000603633 SKIP12755 728 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 NDUFA8P51970 172 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 TCTN1Q2MV58 587 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 KANK3Q6NY19 840 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 CNNM4Q6P4Q7 775 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 PPP4R3CPQ6ZMV5 832 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 SLC24A5Q71RS6 500 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 DYMQ7RTS9 669 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 CCDC65Q8IXS2 484 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 KCNN1Q92952 543 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 CCDC51Q96ER9 411 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 GBP4Q96PP9 640 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 ADAM2Q99965 735 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 TRAIPQ9BWF2 469 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 FZD8Q9H461 694 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 ZHX3Q9H4I2 956 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 MINDY3Q9H8M7 445 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 POLD4Q9HCU8 107 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 PIN4Q9Y237 131 aaKnown RBP17.29■□□□□ 0.36
LINC00221-201ENST00000603633 MYH9P35579 1960 aaKnown RBP17.29■□□□□ 0.36
LINC00221-201ENST00000603633 STAG3L1P0CL83 205 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 FGFR4P22455 802 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 DSC3Q14574 896 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 NOTUMQ6P988 496 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 C7orf25Q9BPX7 421 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 TRIM9Q9C026 710 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 ARHGAP28Q9P2N2 729 aa17.29■□□□□ 0.36
LINC00221-201ENST00000603633 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.28■□□□□ 0.36
LINC00221-201ENST00000603633 ACKR2O00590 384 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 TRAK2O60296 914 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 ZNF202O95125 648 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 MAPTP10636 758 aaKnown RBP17.28■□□□□ 0.36
LINC00221-201ENST00000603633 SMAD3P84022 425 aaKnown RBP17.28■□□□□ 0.36
LINC00221-201ENST00000603633 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
LINC00221-201ENST00000603633 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00221-201ENST00000603633 FAM178BQ8IXR5 827 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 MYOCDQ8IZQ8 938 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 TOP1MTQ969P6 601 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 DNAJC19Q96DA6 116 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 SERTAD1Q9UHV2 236 aa17.28■□□□□ 0.36
LINC00221-201ENST00000603633 ACTN4O43707 911 aaKnown RBP17.27■□□□□ 0.36
LINC00221-201ENST00000603633 PRKCBP05771 671 aa17.27■□□□□ 0.36
LINC00221-201ENST00000603633 IDEP14735 1019 aa17.27■□□□□ 0.36
LINC00221-201ENST00000603633 SARSP49591 514 aaKnown RBP17.27■□□□□ 0.36
LINC00221-201ENST00000603633 RAB27AP51159 221 aa17.27■□□□□ 0.36
LINC00221-201ENST00000603633 NCKAP1LP55160 1127 aa17.27■□□□□ 0.36
LINC00221-201ENST00000603633 STRN3Q13033 797 aa17.27■□□□□ 0.36
LINC00221-201ENST00000603633 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
LINC00221-201ENST00000603633 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
LINC00221-201ENST00000603633 TWF2Q6IBS0 349 aaKnown RBP17.27■□□□□ 0.36
LINC00221-201ENST00000603633 RTN4RL1Q86UN2 441 aaPredicted RBP17.27■□□□□ 0.36
LINC00221-201ENST00000603633 NPAS4Q8IUM7 802 aa17.27■□□□□ 0.36
LINC00221-201ENST00000603633 ELAC1Q9H777 363 aaKnown RBP17.27■□□□□ 0.36
LINC00221-201ENST00000603633 A0A0U1RQF3 1178 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 FRMD3A2A2Y4 597 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 MGEA5O60502 916 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 TSPAN1O60635 241 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 GJB5O95377 273 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 HOXA11P31270 313 aaPredicted RBP17.26■□□□□ 0.35
LINC00221-201ENST00000603633 UBE2HP62256 183 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 FAM189BP81408 668 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 PRPF4BQ13523 1007 aaKnown RBP17.26■□□□□ 0.35
LINC00221-201ENST00000603633 RAB30Q15771 203 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 AMHR2Q16671 573 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 APBB1IPQ7Z5R6 666 aaPredicted RBP17.26■□□□□ 0.35
LINC00221-201ENST00000603633 HERC6Q8IVU3 1022 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 TMEM161BQ8NDZ6 487 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 LINC01599Q8WXQ3 324 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 PAGE5Q96GU1 130 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 ZBED2Q9BTP6 218 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 KIFC3Q9BVG8 833 aa17.26■□□□□ 0.35
LINC00221-201ENST00000603633 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms