RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 DDX12PQ92771 950 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DHX58Q96C10 678 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TIGD1Q96MW7 591 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PLIN2Q99541 437 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 C7orf25Q9BPX7 421 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GTPBP4Q9BZE4 634 aaKnown RBP10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TRIM9Q9C026 710 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TMEM134Q9H6X4 195 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 AGPAT5Q9NUQ2 364 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 HOOK1Q9UJC3 728 aaKnown RBP10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GINS2Q9Y248 185 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CNTNAP2Q9UHC6 1331 aa10.47□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PTPRSQ13332 1948 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 TTC3P53804 2025 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 A0A1B0GVL5 298 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 PVALEFA0A1B0GWK0 134 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ACTN4O43707 911 aaKnown RBP10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FAM13AO94988 1023 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 AMHP03971 560 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ZSCAN20P17040 1043 aaPredicted RBP10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CD52P31358 61 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 NPTX2P47972 431 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 NDUFA8P51970 172 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 NCKAP1LP55160 1127 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 WDR5P61964 334 aaKnown RBP10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 MBTD1Q05BQ5 628 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GIT2Q14161 759 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 LRIT3Q3SXY7 679 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 NOTUMQ6P988 496 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CHRDL2Q6WN34 429 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 STXBP4Q6ZWJ1 553 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 C16orf59Q7L2K0 433 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CATSPER4Q7RTX7 472 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CCDC65Q8IXS2 484 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FMR1NBQ8N0W7 255 aaPredicted RBP10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 DNAJC19Q96DA6 116 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 RNPC3Q96LT9 517 aaKnown RBP10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 CCDC113Q9H0I3 377 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 FZD8Q9H461 694 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ELAC1Q9H777 363 aaKnown RBP10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 AGO3Q9H9G7 860 aaKnown RBP10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GDPD2Q9HCC8 539 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 GPRC5CQ9NQ84 441 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 KMT5AQ9NQR1 393 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 RGS18Q9NS28 235 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 ST3GAL5Q9UNP4 418 aa10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 NOC2LQ9Y3T9 749 aaKnown RBP10.46□□□□□ -0.73
SQSTM1P1-201ENST00000603451 UBE4BO95155 1302 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 A0A087WWV3 80 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 DENND3A2RUS2 1198 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MYMKA6NI61 221 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 INO80B-WBP1J3KQ70 363 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ACKR2O00590 384 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 HOXA2O43364 376 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 TRAK2O60296 914 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ZNF202O95125 648 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 STAG3L1P0CL83 205 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SRGAP2CP0DJJ0 459 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 EPHB4P54760 987 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 PEX3P56589 373 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 DSC3Q14574 896 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 KRBA2Q6ZNG9 492 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SLC24A5Q71RS6 500 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 KSR1Q8IVT5 923 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 FAM178BQ8IXR5 827 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CNNM3Q8NE01 707 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ENGASEQ8NFI3 743 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 BSNDQ8WZ55 320 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CHAMP1Q96JM3 812 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CDHR5Q9HBB8 845 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SLC4A7Q9Y6M7 1214 aa10.45□□□□□ -0.74
SQSTM1P1-201ENST00000603451 RALGAPA2Q2PPJ7 1873 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ADGRA3Q8IWK6 1321 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 TMEM265A0A087WTH1 108 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CARNS1A5YM72 827 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CCDC169A6NNP5 214 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 K7ERI5 159 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 GTPBP6O43824 516 aaPredicted RBP10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 TSPAN1O60635 241 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 KINO60870 393 aaKnown RBP10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 PRKCBP05771 671 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ACRP10323 421 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SARSP49591 514 aaKnown RBP10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SMAD3P84022 425 aaKnown RBP10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 NFX1Q12986 1120 aaKnown RBP10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 STRN3Q13033 797 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 DHX8Q14562 1220 aaKnown RBP10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 AMHR2Q16671 573 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SLC27A1Q6PCB7 646 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ZPBP2Q6X784 338 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 UNC13DQ70J99 1090 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MAEAQ7L5Y9 396 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 OTOP2Q7RTS6 562 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 NPAS4Q8IUM7 802 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 HACE1Q8IYU2 909 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MYCT1Q8N699 235 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 TMEM161BQ8NDZ6 487 aa10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CCDC47Q96A33 483 aaKnown RBP10.44□□□□□ -0.74
SQSTM1P1-201ENST00000603451 GOLPH3LQ9H4A5 285 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms