RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SLC7A3Q8WY07 619 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 CASP10Q92851 521 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 PBXIP1Q96AQ6 731 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 TMEM169Q96HH4 297 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 CEP170P1Q96L14 293 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 IFT122Q9HBG6 1241 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 WRAP73Q9P2S5 460 aaPredicted RBP14.74□□□□□ -0.05
RPS28-204ENST00000602140 TPCN1Q9ULQ1 816 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 INPP5FQ9Y2H2 1132 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 COL4A3BPQ9Y5P4 624 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 HCFC2Q9Y5Z7 792 aa14.74□□□□□ -0.05
RPS28-204ENST00000602140 STK36Q9NRP7 1315 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 MARCH6O60337 910 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 PFKFB2O60825 505 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 ZNF623O75123 536 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 SP100P23497 879 aaPredicted RBP14.73□□□□□ -0.05
RPS28-204ENST00000602140 POLGP54098 1239 aaPredicted RBP14.73□□□□□ -0.05
RPS28-204ENST00000602140 NHLH1Q02575 133 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 BMS1Q14692 1282 aaKnown RBP14.73□□□□□ -0.05
RPS28-204ENST00000602140 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 NOMO2Q5JPE7 1267 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 TMEM173Q86WV6 379 aaPredicted RBP14.73□□□□□ -0.05
RPS28-204ENST00000602140 RSPH1Q8WYR4 309 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 HAS1Q92839 578 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 NRDE2Q9H7Z3 1164 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 TBC1D13Q9NVG8 400 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 CDH22Q9UJ99 828 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 TECTAO75443 2155 aa14.73□□□□□ -0.05
RPS28-204ENST00000602140 TBX3O15119 743 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 CLASP2O75122 1294 aaKnown RBP14.72□□□□□ -0.05
RPS28-204ENST00000602140 OFD1O75665 1012 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 SRGAP2CP0DJJ0 459 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 RAB27AP51159 221 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 RNASELQ05823 741 aaKnown RBP14.72□□□□□ -0.05
RPS28-204ENST00000602140 EPHA7Q15375 998 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 EARS2Q5JPH6 523 aaKnown RBP14.72□□□□□ -0.05
RPS28-204ENST00000602140 EXOC8Q8IYI6 725 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 TMEM87AQ8NBN3 555 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 PRPF31Q8WWY3 499 aaKnown RBP14.72□□□□□ -0.05
RPS28-204ENST00000602140 PSPC1Q8WXF1 523 aaKnown RBP14.72□□□□□ -0.05
RPS28-204ENST00000602140 AUTS2Q8WXX7 1259 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 TMEM143Q96AN5 459 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 IGSF21Q96ID5 467 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 LXNQ9BS40 222 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 GBP3Q9H0R5 595 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 ZBP1Q9H171 429 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 DHX33Q9H6R0 707 aaKnown RBP14.72□□□□□ -0.05
RPS28-204ENST00000602140 TSHZ2Q9NRE2 1034 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 BMP2KQ9NSY1 1161 aaPredicted RBP14.72□□□□□ -0.05
RPS28-204ENST00000602140 AGPAT5Q9NUQ2 364 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 RGL1Q9NZL6 768 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 ORC3Q9UBD5 711 aaPredicted RBP14.72□□□□□ -0.05
RPS28-204ENST00000602140 PCDHB2Q9Y5E7 798 aa14.72□□□□□ -0.05
RPS28-204ENST00000602140 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.71□□□□□ -0.05
RPS28-204ENST00000602140 CARNS1A5YM72 827 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 CTDNEP1O95476 244 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 GALTP07902 379 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 YWHABP31946 246 aaKnown RBP14.71□□□□□ -0.05
RPS28-204ENST00000602140 RFC5P40937 340 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 SIGLEC14Q08ET2 396 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 LAMTOR4Q0VGL1 99 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 NCAPH2Q6IBW4 605 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 CES5AQ6NT32 575 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 AGMOQ6ZNB7 445 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 SRGAP1Q7Z6B7 1085 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 DDX53Q86TM3 631 aaKnown RBP14.71□□□□□ -0.05
RPS28-204ENST00000602140 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 C4orf19Q8IY42 314 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 BCL7CQ8WUZ0 217 aaPredicted RBP14.71□□□□□ -0.05
RPS28-204ENST00000602140 PGBD4Q96DM1 585 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 DYDC2Q96IM9 177 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 NAP1L4Q99733 375 aaKnown RBP14.71□□□□□ -0.05
RPS28-204ENST00000602140 ADAM7Q9H2U9 754 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 MINDY3Q9H8M7 445 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 DNAJB4Q9UDY4 337 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 PPME1Q9Y570 386 aa14.71□□□□□ -0.05
RPS28-204ENST00000602140 FAM205CA6NFA0 338 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 ZBTB39O15060 712 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 B4GALT3O60512 393 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 BAG4O95429 457 aaKnown RBP14.7□□□□□ -0.06
RPS28-204ENST00000602140 CTSAP10619 480 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 SLC11A1P49279 550 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 MRE11P49959 708 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 CYP4A11Q02928 519 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 ITIH3Q06033 890 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 NR5A1Q13285 461 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 CTTNQ14247 550 aaKnown RBP14.7□□□□□ -0.06
RPS28-204ENST00000602140 EMC2Q15006 297 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 PTPN21Q16825 1174 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 XKR9Q5GH70 373 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 OTUD6AQ7L8S5 288 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 ZBTB33Q86T24 672 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 ZNF280BQ86YH2 543 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 SUGP1Q8IWZ8 645 aaKnown RBP14.7□□□□□ -0.06
RPS28-204ENST00000602140 FBXL6Q8N531 539 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 URGCPQ8TCY9 931 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 POMKQ9H5K3 350 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 ZSWIM4Q9H7M6 989 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 NR2E1Q9Y466 385 aa14.7□□□□□ -0.06
RPS28-204ENST00000602140 ZNF318Q5VUA4 2279 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms