RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 HAUS4Q9H6D7 363 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
VRK3-223ENST00000601341 TAB2Q9NYJ8 693 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 PCNTO95613 3336 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 CCDC151A5D8V7 595 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 EIF3DO15371 548 aaKnown RBP eCLIP12.81□□□□□ -0.36
VRK3-223ENST00000601341 DUSP11O75319 330 aaKnown RBP12.81□□□□□ -0.36
VRK3-223ENST00000601341 GCNT3O95395 438 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 CPT1AP50416 773 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 SMTNP53814 917 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 PRMT2P55345 433 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 RTP1P59025 263 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 LRRC63Q05C16 580 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 EMC2Q15006 297 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 BRD3Q15059 726 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 WHAMMP3Q1A5X7 153 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 EPM2AIP1Q7L775 607 aaPredicted RBP12.81□□□□□ -0.36
VRK3-223ENST00000601341 ZNF720Q7Z2F6 126 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 CCDC170Q8IYT3 715 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 CSGALNACT2Q8N6G5 542 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 LRRN4CLQ8ND94 238 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 RAET1EQ8TD07 263 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 HNRNPLLQ8WVV9 542 aaKnown RBP12.81□□□□□ -0.36
VRK3-223ENST00000601341 ERGIC2Q96RQ1 377 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 TSG101Q99816 390 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 JPH2Q9BR39 696 aaPredicted RBP12.81□□□□□ -0.36
VRK3-223ENST00000601341 C16orf70Q9BSU1 422 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 FGFBP2Q9BYJ0 223 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 SEMA6BQ9H3T3 888 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 GPRC5CQ9NQ84 441 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 KCNG1Q9UIX4 513 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 FHOD1Q9Y613 1164 aa12.81□□□□□ -0.36
VRK3-223ENST00000601341 TRIM49BA6NDI0 452 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 H3BRB1 525 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 SEPT4O43236 478 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 GAS2O43903 313 aaKnown RBP12.8□□□□□ -0.36
VRK3-223ENST00000601341 ADCY3O60266 1144 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 MAFO75444 373 aaPredicted RBP12.8□□□□□ -0.36
VRK3-223ENST00000601341 NDUFA10O95299 355 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 ZNF286BP0CG31 522 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 CASP5P51878 434 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 PMS1P54277 932 aaKnown RBP12.8□□□□□ -0.36
VRK3-223ENST00000601341 KRT83P78385 493 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 CACNB2Q08289 660 aaPredicted RBP12.8□□□□□ -0.36
VRK3-223ENST00000601341 TBC1D8BQ0IIM8 1120 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 ALCAMQ13740 583 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 BMT2Q1RMZ1 405 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 ZNF484Q5JVG2 852 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 ANKRD40Q6AI12 368 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 TRPV1Q8NER1 839 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 CPLX3Q8WVH0 158 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 FIZ1Q96SL8 496 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 TUBGCP2Q9BSJ2 902 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 RNPEPQ9H4A4 650 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 TUT1Q9H6E5 874 aaKnown RBP12.8□□□□□ -0.36
VRK3-223ENST00000601341 XPNPEP1Q9NQW7 623 aa12.8□□□□□ -0.36
VRK3-223ENST00000601341 EPN1Q9Y6I3 576 aaPredicted RBP12.8□□□□□ -0.36
VRK3-223ENST00000601341 UBE4BO95155 1302 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 HMGCRP04035 888 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 PNMA6AP0CW24 399 aaPredicted RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 MYBP10242 640 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 ELNP15502 786 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 CNGA1P29973 690 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 NMT1P30419 496 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 PEX3P56589 373 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 C1QTNF8P60827 252 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 DMP1Q13316 513 aaPredicted RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 KNOP1Q1ED39 458 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 NELFCDQ8IXH7 590 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 SPIRE2Q8WWL2 714 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 LENG1Q96BZ8 264 aaPredicted RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 IFT74Q96LB3 600 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 NAPGQ99747 312 aaPredicted RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 DUSP9Q99956 384 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 TTYH3Q9C0H2 523 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 ARFGAP3Q9NP61 516 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 LZTFL1Q9NQ48 299 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 ZNHIT6Q9NWK9 470 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 MYH9P35579 1960 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 ZSWIM8A7E2V4 1837 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 TTC26A0AVF1 554 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 ZBTB42B2RXF5 422 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 K7ENM7 598 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 PRKAR2AP13861 404 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 HNRNPH3P31942 346 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 ARHGAP25P42331 645 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 CHMP4BP1P59074 171 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 ZBED6P86452 979 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 TRIM32Q13049 653 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 PPP4R3CPQ6ZMV5 832 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 TCP11Q8WWU5 503 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 NTPCRQ9BSD7 190 aaKnown RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
VRK3-223ENST00000601341 KCTD10Q9H3F6 313 aa12.79□□□□□ -0.36
VRK3-223ENST00000601341 ST6GALNAC4Q9H4F1 302 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms