RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 RNASELQ05823 741 aaKnown RBP18.88■□□□□ 0.61
USE1-208ENST00000600970 TSGA10IPQ3SY00 556 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 MTERF2Q49AM1 385 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 KLHL5Q96PQ7 755 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 RIT2Q99578 217 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 TEKT3Q9BXF9 490 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 NIFKQ9BYG3 293 aaKnown RBP18.88■□□□□ 0.61
USE1-208ENST00000600970 GBP3Q9H0R5 595 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 KCNK12Q9HB15 430 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 SEPT9Q9UHD8 586 aaPredicted RBP18.88■□□□□ 0.61
USE1-208ENST00000600970 PIN4Q9Y237 131 aaKnown RBP18.88■□□□□ 0.61
USE1-208ENST00000600970 IGKV6-21A0A0C4DH24 114 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 CCDC196A0A1B0GTZ2 297 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 TMEM150BA6NC51 233 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 SPDYE4A6NLX3 237 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 PRPF3O43395 683 aaKnown RBP18.87■□□□□ 0.61
USE1-208ENST00000600970 B4GALT3O60512 393 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 ZNF623O75123 536 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 KLRC2P26717 231 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 ANGPT1Q15389 498 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 ZNF280BQ86YH2 543 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 DTWD2Q8NBA8 298 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 SLC5A5Q92911 643 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 GJA10Q969M2 543 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 CCDC136Q96JN2 1154 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 RTP3Q9BQQ7 232 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 EMILIN2Q9BXX0 1053 aa18.87■□□□□ 0.61
USE1-208ENST00000600970 INO80BQ9C086 356 aaPredicted RBP18.87■□□□□ 0.61
USE1-208ENST00000600970 STBD1O95210 358 aa18.86■□□□□ 0.61
USE1-208ENST00000600970 CNPP09543 421 aaKnown RBP18.86■□□□□ 0.61
USE1-208ENST00000600970 DNM2P50570 870 aa18.86■□□□□ 0.61
USE1-208ENST00000600970 LRCH2Q5VUJ6 765 aa18.86■□□□□ 0.61
USE1-208ENST00000600970 ZNF410Q86VK4 478 aa18.86■□□□□ 0.61
USE1-208ENST00000600970 SIX5Q8N196 739 aa18.86■□□□□ 0.61
USE1-208ENST00000600970 BICD2Q8TD16 824 aa18.86■□□□□ 0.61
USE1-208ENST00000600970 SH2D3AQ9BRG2 576 aa18.86■□□□□ 0.61
USE1-208ENST00000600970 FBXL21Q9UKT6 434 aa18.86■□□□□ 0.61
USE1-208ENST00000600970 LILRB3O75022 631 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 PSMD10O75832 226 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 SSBP05455 408 aaKnown RBP eCLIP18.85■□□□□ 0.61
USE1-208ENST00000600970 RAB27AP51159 221 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 USP11P51784 963 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 LETM2Q2VYF4 491 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 XKR3Q5GH77 459 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 AGMOQ6ZNB7 445 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 C15orf39Q6ZRI6 1047 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 CATSPER4Q7RTX7 472 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 RHPN2Q8IUC4 686 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 KSR1Q8IVT5 923 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 RDM1Q8NG50 284 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 PHKBQ93100 1093 aa18.85■□□□□ 0.61
USE1-208ENST00000600970 SUCLA2Q9P2R7 463 aaPredicted RBP18.85■□□□□ 0.61
USE1-208ENST00000600970 NID2Q14112 1375 aa18.84■□□□□ 0.61
USE1-208ENST00000600970 NARSO43776 548 aaKnown RBP18.84■□□□□ 0.61
USE1-208ENST00000600970 N4BP1O75113 896 aaKnown RBP18.84■□□□□ 0.61
USE1-208ENST00000600970 DDHD2O94830 711 aa18.84■□□□□ 0.61
USE1-208ENST00000600970 KRT32Q14532 448 aa18.84■□□□□ 0.61
USE1-208ENST00000600970 MIER3Q7Z3K6 550 aa18.84■□□□□ 0.61
USE1-208ENST00000600970 PGBD4Q96DM1 585 aa18.84■□□□□ 0.61
USE1-208ENST00000600970 IGSF9Q9P2J2 1179 aa18.84■□□□□ 0.61
USE1-208ENST00000600970 STK39Q9UEW8 545 aa18.84■□□□□ 0.61
USE1-208ENST00000600970 PTPRZ1P23471 2315 aaPredicted RBP18.84■□□□□ 0.61
USE1-208ENST00000600970 MAFO75444 373 aaPredicted RBP18.83■□□□□ 0.6
USE1-208ENST00000600970 ALDH2P05091 517 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 HMGB1P09429 215 aaKnown RBP18.83■□□□□ 0.6
USE1-208ENST00000600970 CPA1P15085 419 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 AFF1P51825 1210 aaKnown RBP18.83■□□□□ 0.6
USE1-208ENST00000600970 FGD1P98174 961 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 B3GNT9Q6UX72 402 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 CCDC148Q8NFR7 591 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 CMASQ8NFW8 434 aaPredicted RBP18.83■□□□□ 0.6
USE1-208ENST00000600970 URGCPQ8TCY9 931 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 NLRP4Q96MN2 994 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 IFT122Q9HBG6 1241 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 MAN1C1Q9NR34 630 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 MRPL17Q9NRX2 175 aaKnown RBP18.83■□□□□ 0.6
USE1-208ENST00000600970 FAN1Q9Y2M0 1017 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 PCDHB2Q9Y5E7 798 aa18.83■□□□□ 0.6
USE1-208ENST00000600970 KRBA1A5PL33 1030 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 NRP1O14786 923 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 CFHP08603 1231 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 AKAP17AQ02040 695 aaKnown RBP18.82■□□□□ 0.6
USE1-208ENST00000600970 NTRK3Q16288 839 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 Q4G0T1 1027 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 Q6ZUG5 572 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 MRPL10Q7Z7H8 261 aaKnown RBP18.82■□□□□ 0.6
USE1-208ENST00000600970 RSAD2Q8WXG1 361 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 FAM193BQ96PV7 902 aaPredicted RBP18.82■□□□□ 0.6
USE1-208ENST00000600970 TMEM175Q9BSA9 504 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 AGPAT5Q9NUQ2 364 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 VPS54Q9P1Q0 977 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 WNT16Q9UBV4 365 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 FAM186AA6NE01 2351 aa18.82■□□□□ 0.6
USE1-208ENST00000600970 CCDC195A0A1B0GUA6 201 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 DDX11L8A8MPP1 907 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 STK25O00506 426 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 C2CD2LO14523 706 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
USE1-208ENST00000600970 ANO5Q75V66 913 aa18.81■□□□□ 0.6
USE1-208ENST00000600970 TBCKQ8TEA7 893 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms