RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	PLEKHG4	Q58EX7	1191 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	UNC13D	Q70J99	1090 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	USP38	Q8NB14	1042 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	DNAJC19	Q96DA6	116 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	IFIH1	Q9BYX4	1025 aa	Known RBP	24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	UBE2O	Q9C0C9	1292 aa	Known RBP	24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	IFT122	Q9HBG6	1241 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	KIAA1468	Q9P260	1216 aa		24.24	■■□□□ 1.47
LTBP4-227	ENST00000600026	PVALEF	A0A1B0GWK0	134 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	RPS6KA5	O75582	802 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	RPN1	P04843	607 aa	Known RBP	24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	EIF4B	P23588	611 aa	Known RBP	24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	TMEM240	Q5SV17	173 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	CNKSR3	Q6P9H4	555 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	FAM228A	Q86W67	206 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	DBF4B	Q8NFT6	615 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	SEPT8	Q92599	483 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	GSDMA	Q96QA5	445 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	ZHX3	Q9H4I2	956 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	PANK4	Q9NVE7	773 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	RMND1	Q9NWS8	449 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	PCDHA5	Q9Y5H7	936 aa		24.23	■■□□□ 1.47
LTBP4-227	ENST00000600026	LRRIQ4	A6NIV6	560 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	GAP43	P17677	238 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	PHKA2	P46019	1235 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	POU5F1B	Q06416	359 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	PAK2	Q13177	524 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	PPP2R5A	Q15172	486 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	ZNF365	Q70YC5	407 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	ERCC4	Q92889	916 aa	Predicted RBP	24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	IFT74	Q96LB3	600 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	ERVK-5	Q9HDB9	667 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	EXOC1	Q9NV70	894 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	PADI3	Q9ULW8	664 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	PTPRS	Q13332	1948 aa		24.22	■■□□□ 1.47
LTBP4-227	ENST00000600026	SFI1	A8K8P3	1242 aa		24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	DLL1	O00548	723 aa		24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	CSDE1	O75534	798 aa	Known RBP	24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	FGFR4	P22455	802 aa		24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	NAMPT	P43490	491 aa		24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	PTEN	P60484	403 aa		24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	RBM43	Q6ZSC3	357 aa	Known RBP	24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	SRGAP1	Q7Z6B7	1085 aa		24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	IFNLR1	Q8IU57	520 aa	Predicted RBP	24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	APBB2	Q92870	758 aa		24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	MINDY3	Q9H8M7	445 aa		24.21	■■□□□ 1.47
LTBP4-227	ENST00000600026	ADGRA3	Q8IWK6	1321 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	FGB	P02675	491 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	ACTN1	P12814	892 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	BMP8B	P34820	402 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	PEX3	P56589	373 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	DMP1	Q13316	513 aa	Predicted RBP	24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	KCNB1	Q14721	858 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	C9orf50	Q5SZB4	431 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	NT5DC1	Q5TFE4	455 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	CDCA2	Q69YH5	1023 aa	Predicted RBP	24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	SPATA20	Q8TB22	786 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	KIFC3	Q9BVG8	833 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	NFKBIZ	Q9BYH8	718 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	GTPBP4	Q9BZE4	634 aa	Known RBP	24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	INO80B	Q9C086	356 aa	Predicted RBP	24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	PRO3102	Q9H379	93 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	C17orf75	Q9HAS0	396 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	PARVG	Q9HBI0	331 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	LARS	Q9P2J5	1176 aa	Known RBP	24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	KCNG1	Q9UIX4	513 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	ST3GAL5	Q9UNP4	418 aa		24.2	■■□□□ 1.46
LTBP4-227	ENST00000600026	GPR182	O15218	404 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	KLRC4	O43908	158 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	PLS3	P13797	630 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	SFPQ	P23246	707 aa	Known RBP eCLIP	24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	NPTX2	P47972	431 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	SARS	P49591	514 aa	Known RBP	24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	ZNF131	P52739	623 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	NFX1	Q12986	1120 aa	Known RBP	24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	COASY	Q13057	564 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	KMT5B	Q4FZB7	885 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	HERC4	Q5GLZ8	1057 aa	Predicted RBP	24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	ODR4	Q5SWX8	454 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	SASS6	Q6UVJ0	657 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	OTOP2	Q7RTS6	562 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	ZBTB8OS	Q8IWT0	167 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	MYCT1	Q8N699	235 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	DEPTOR	Q8TB45	409 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	SEL1L	Q9UBV2	794 aa		24.19	■■□□□ 1.46
LTBP4-227	ENST00000600026	FRMD3	A2A2Y4	597 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	CCDC169	A6NNP5	214 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	MBTD1	Q05BQ5	628 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	PSMD2	Q13200	908 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	TRIML1	Q8N9V2	468 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	HERVK_113	Q902F9	699 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	ANP32E	Q9BTT0	268 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	C2orf40	Q9H1Z8	148 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	TMX1	Q9H3N1	280 aa		24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	RANBP2	P49792	3224 aa	Known RBP	24.18	■■□□□ 1.46
LTBP4-227	ENST00000600026	INO80B-WBP1	J3KQ70	363 aa		24.17	■■□□□ 1.46
LTBP4-227	ENST00000600026	BAIAP3	O94812	1187 aa		24.17	■■□□□ 1.46
LTBP4-227	ENST00000600026	RHOBTB3	O94955	611 aa		24.17	■■□□□ 1.46
LTBP4-227	ENST00000600026	SHH	Q15465	462 aa		24.17	■■□□□ 1.46

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms