RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 CAV1Q03135 178 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 NME3Q13232 169 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 ZNF668Q96K58 619 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-208ENST00000599343 ZNF711Q9Y462 761 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-208ENST00000599343 LIFRP42702 1097 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 NCAPHQ15003 741 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 NBPF9Q3BBW0 867 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 SARM1Q6SZW1 724 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 FAM160B2Q86V87 743 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 THEM5Q8N1Q8 247 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 TEX12Q9BXU0 123 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 CYP26B1Q9NR63 512 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 TMEM260Q9NX78 707 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 CALB1P05937 261 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 GPC3P51654 580 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 PRELPP51888 382 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 NEK2P51955 445 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 PTK2BQ14289 1009 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 ACBD5Q5T8D3 534 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-208ENST00000599343 INTS2Q9H0H0 1204 aaKnown RBP12.58□□□□□ -0.4
SCN8A-208ENST00000599343 FAM96AQ9H5X1 160 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 SH3GLB2Q9NR46 395 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 LZTS1Q9Y250 596 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 FAM95CA0A1B0GW59 222 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 UBA6A0AVT1 1052 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-208ENST00000599343 FGFR4P22455 802 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 CACNB3P54284 484 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 ROR1Q01973 937 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 UBE3AQ05086 875 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 MTMR1Q13613 665 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 CCDC144BQ3MJ40 725 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 ZNF568Q3ZCX4 644 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 PADI6Q6TGC4 694 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 FAM196AQ6ZSG2 479 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
SCN8A-208ENST00000599343 OTULINQ96BN8 352 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 MRPL40Q9NQ50 206 aaKnown RBP12.58□□□□□ -0.4
SCN8A-208ENST00000599343 CFAP43Q8NDM7 1665 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 DCAF4L1Q3SXM0 396 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 NLRP10Q86W26 655 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 XXYLT1Q8NBI6 393 aa12.58□□□□□ -0.4
SCN8A-208ENST00000599343 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-208ENST00000599343 SUPT3HO75486 399 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 FTLP02792 175 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 TOB2Q14106 344 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 FASTKD1Q53R41 847 aaKnown RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 SYCP2LQ5T4T6 812 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 TBC1D10CQ8IV04 446 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 SNF8Q96H20 258 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 POTEB3A0JP26 581 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 POTECB2RU33 542 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 JAK3P52333 1124 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 DRAP1Q14919 205 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 CYTH1Q15438 398 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 FAM182BQ5T319 152 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 HEATR6Q6AI08 1181 aaKnown RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 POTEBQ6S5H4 581 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 CYB5R4Q7L1T6 521 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ATP6V1G3Q96LB4 118 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ASPSCR1Q9BZE9 553 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 HPCAL4Q9UM19 191 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 TRAF3IP3Q9Y228 551 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 TMCC1O94876 653 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 SASH1O94885 1247 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 GNA15P30679 374 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 RECQLP46063 649 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ALDH18A1P54886 795 aaKnown RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 NBPF10Q6P3W6 841 aaKnown RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 OR9Q1Q8NGQ5 310 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 AFG1LQ8WV93 481 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ZFYVE19Q96K21 471 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ADAM33Q9BZ11 813 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 DDX28Q9NUL7 540 aaKnown RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 FBXL5Q9UKA1 691 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 AURKCQ9UQB9 309 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 NMT2O60551 498 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ATP1A1P05023 1023 aaKnown RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ADORA2BP29275 332 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 GUCY1A3Q02108 690 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 CCDC137Q6PK04 289 aaKnown RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 USP17L6PQ6QN14 398 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ANKMY2Q8IV38 441 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 RFWD2Q8NHY2 731 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 TAF1DQ9H5J8 278 aaPredicted RBP12.57□□□□□ -0.4
SCN8A-208ENST00000599343 PRKAG2Q9UGJ0 569 aa12.57□□□□□ -0.4
SCN8A-208ENST00000599343 ANO9A1A5B4 782 aa12.56□□□□□ -0.4
SCN8A-208ENST00000599343 TEX33O43247 280 aa12.56□□□□□ -0.4
SCN8A-208ENST00000599343 GH2P01242 217 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms